ATTED-II : GeneCoexpression result

Species	Gene	Description
sot-r.1	102589772	transcription factor bHLH111
sly-u.5	101252913	transcription factor bHLH112
nta-r.1	107790577	transcription factor bHLH111-like
nta-r.1	107772681	uncharacterized LOC107772681
ath-u.5	AT1G31050	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
gma-u.5	100793512	transcription factor bHLH111
gma-u.5	100527800	basic helix-loop-helix (bHLH) DNA-binding protein
bra-r.6	103840273	transcription factor bHLH111
vvi-u.5	100240845	transcription factor bHLH111
ppo-u.5	7459079	transcription factor bHLH111
ppo-u.5	7457838	transcription factor bHLH111
mtr-u.5	25484910	transcription factor bHLH111
ghi-r.1	107897758	transcription factor bHLH111
ghi-r.1	107909931	transcription factor bHLH111
bna-r.1	106352369	transcription factor bHLH111
bna-r.1	106364379	transcription factor bHLH111
cit-r.1	102610751	transcription factor bHLH111
osa-u.5	4343202	uncharacterized LOC4343202
zma-u.5	103647665	transcription factor bHLH111
zma-u.5	103633112	uncharacterized LOC103633112
sbi-r.1	8077274	transcription factor bHLH111
bdi-r.1	100841083	transcription factor bHLH111

Annotation

functional annotation

KEGG

GO BP

GO:0006357 [list] [network] regulation of transcription by RNA polymerase II

(394 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(2556 genes)

IEA

GO MF

GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(177 genes)	IEA
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific	(226 genes)	IEA
GO:0046983 [list] [network] protein dimerization activity	(559 genes)	IEA

Protein

XP_006348502.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto_nucl 5

(predict for XP_006348502.2)

Subcellular
localization
TargetP

chlo 5, other 4

(predict for XP_006348502.2)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102589772	sly-u.5 for 101252913	nta-r.1 for 107790577	nta-r.1 for 107772681	ath-u.5 for AT1G31050	gma-u.5 for 100793512	gma-u.5 for 100527800	bra-r.6 for 103840273	vvi-u.5 for 100240845	ppo-u.5 for 7459079	ppo-u.5 for 7457838	mtr-u.5 for 25484910	ghi-r.1 for 107897758	ghi-r.1 for 107909931	bna-r.1 for 106352369	bna-r.1 for 106364379	cit-r.1 for 102610751	osa-u.5 for 4343202	zma-u.5 for 103647665	zma-u.5 for 103633112	sbi-r.1 for 8077274	bdi-r.1 for 100841083