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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-m.5   547736   cyclin-H1-1 
 gma-u.5   547736   cyclin-H1-1 
 gma-r.7   547736   cyclin-H1-1 
 gma-u.5   100800023   cyclin-H1-1 
 gma-u.5   100790589   cyclin-H1-1 
 mtr-u.5   11415666   cyclin-H1-1 
 ppo-u.5   18098692   cyclin-H1-1 
 ath-u.5   CYCH;1   cyclin H;1 
 bra-r.6   103854664   cyclin-H1-1 
 bra-r.6   103837174   cyclin-H1-1 
 vvi-u.5   100252789   cyclin-H1-1 
 ghi-r.1   107914476   cyclin-H1-1 
 ghi-r.1   107909694   cyclin-H1-1-like 
 ghi-r.1   107895095   cyclin-H1-1 
 bna-r.1   125574906   cyclin-H1-1 
 bna-r.1   111200847   cyclin-H1-1-like 
 cit-r.1   102628605   cyclin-H1-1 
 sly-u.5   101248768   cyclin-H1-1 
 sly-u.5   101246966   cyclin-H1-1 
 sot-r.1   102603534   cyclin-H1-1-like 
 sot-r.1   102594849   cyclin-H1-1-like 
 nta-r.1   107795645   cyclin-H1-1 
 nta-r.1   107783076   cyclin-H1-1 
 nta-r.1   107784183   cyclin-H1-1-like 
 osa-u.5   4334040   cyclin-H1-1-like 
 zma-u.5   100283483   uncharacterized LOC100283483 
 tae-r.2   123096046   cyclin-H1-1 
 tae-r.2   123086938   cyclin-H1-1 
 tae-r.2   123091038   cyclin-H1-1 
 hvu-r.1   123447709   cyclin-H1-1 
 hvu-r.1   123409592   cyclin-H1-1-like 
 sbi-r.1   8060506   cyclin-H1-1 
 bdi-r.1   100830061   cyclin-H1-1 
 cre-r.1   CHLRE_14g632783v5   uncharacterized protein 

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Top 50 coexpressed genes to 547736 (gma-m.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 547736 (gma-m.5 coexpression data)

CoexMap""


gmaLOC547736 | Entrez gene ID : 547736      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 1 1 1 2 1 3 2 1 2 2 3 1 1 3 2 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
Function cyclin-H1-1
KEGG gmx03022 [list] [network] Basal transcription factors (90 genes)
gmx03420 [list] [network] Nucleotide excision repair (129 genes)
GO BP
GO:0000079 [list] [network] regulation of cyclin-dependent protein serine/threonine kinase activity  (102 genes)  IEA  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (844 genes)  IEA  
GO CC
GO:0070985 [list] [network] transcription factor TFIIK complex  (7 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0016538 [list] [network] cyclin-dependent protein serine/threonine kinase regulator activity  (100 genes)  IEA  
Protein XP_003526926.1 [sequence] [blastp]
XP_006581842.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  cyto 1,  plas 1,  golg_plas 1  (predict for XP_003526926.1)
nucl 4,  cyto_nucl 3,  mito 1,  cyto 1,  plas 1,  chlo_mito 1,  golg_plas 1  (predict for XP_006581842.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_003526926.1)
other 6,  mito 4  (predict for XP_006581842.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-m.5
for
547736
gma-u.5
for
547736
gma-r.7
for
547736
gma-u.5
for
100800023
gma-u.5
for
100790589
mtr-u.5
for
11415666
ppo-u.5
for
18098692
ath-u.5
for
CYCH;1
bra-r.6
for
103854664
bra-r.6
for
103837174
vvi-u.5
for
100252789
ghi-r.1
for
107914476
ghi-r.1
for
107909694
ghi-r.1
for
107895095
bna-r.1
for
125574906
bna-r.1
for
111200847
cit-r.1
for
102628605
sly-u.5
for
101248768
sly-u.5
for
101246966
sot-r.1
for
102603534
sot-r.1
for
102594849
nta-r.1
for
107795645
nta-r.1
for
107783076
nta-r.1
for
107784183
osa-u.5
for
4334040
zma-u.5
for
100283483
tae-r.2
for
123096046
tae-r.2
for
123086938
tae-r.2
for
123091038
hvu-r.1
for
123447709
hvu-r.1
for
123409592
sbi-r.1
for
8060506
bdi-r.1
for
100830061
cre-r.1
for
CHLRE_14g632783v5

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Ortholog ID: 3843
Species gma gma gma mtr ppo ath bra bra vvi ghi ghi ghi bna cit sly sly sot sot nta nta nta osa zma tae tae tae hvu hvu sbi bdi cre
Symbol LOC547736 LOC100800023 LOC100790589 LOC11415666 LOC18098692 CYCH;1 LOC103854664 LOC103837174 LOC100252789 LOC107895095 LOC107915052 LOC107927309 LOC111200847 LOC102628605 LOC101248768 LOC101246966 LOC102603534 LOC102594849 LOC107795645 LOC107783076 LOC107784183 LOC4334040 LOC100283483 LOC123096046 LOC123086938 LOC123091038 LOC123447709 LOC123409592 LOC8060506 LOC100830061 CHLRE_14g632783v5
Function* cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin H;1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1-like cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1-like cyclin-H1-1-like cyclin-H1-1 cyclin-H1-1 cyclin-H1-1-like cyclin-H1-1-like uncharacterized LOC100283483 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1-like cyclin-H1-1 cyclin-H1-1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03022 Basal transcription factors 2
gma03420 Nucleotide excision repair 2
gma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03420 Nucleotide excision repair 3
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr03010 Ribosome 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 7
bra03420 Nucleotide excision repair 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 11
ghi03420 Nucleotide excision repair 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 11
ghi03420 Nucleotide excision repair 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 11
ghi03420 Nucleotide excision repair 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 3
bna03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00340 Histidine metabolism 2
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 7
sly03420 Nucleotide excision repair 3
sly03430 Mismatch repair 2
sly03460 Fanconi anemia pathway 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
zma03022 Basal transcription factors 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03018 RNA degradation 3
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03040 Spliceosome 3
hvu03460 Fanconi anemia pathway 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi03022 Basal transcription factors 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 547736 100800023 100790589 11415666 18098692 832824 103854664 103837174 100252789 107895095 107915052 107927309 111200847 102628605 101248768 101246966 102603534 102594849 107795645 107783076 107784183 4334040 100283483 123096046 123086938 123091038 123447709 123409592 8060506 100830061 5718336
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