Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-r.7   100799471   U1 small nuclear ribonucleoprotein A 
 gma-u.5   100799471   U1 small nuclear ribonucleoprotein A 
 gma-m.5   100799471   U1 small nuclear ribonucleoprotein A 
 gma-u.5   100780983   uncharacterized LOC100780983 
 mtr-u.5   11410894   U1 small nuclear ribonucleoprotein A 
 ppo-u.5   7462598   RNA-binding protein L 
 ath-u.5   AT2G42240   RNA-binding (RRM/RBD/RNP motifs) family protein 
 vvi-u.5   100247532   RNA-binding protein L 
 ghi-r.1   107913371   RNA-binding protein L 
 ghi-r.1   107913223   RNA-binding protein L 
 cit-r.1   102623625   uncharacterized LOC102623625 
 sly-u.5   101267756   U1 small nuclear ribonucleoprotein A 
 sot-r.1   102581347   U2 small nuclear ribonucleoprotein B'' 
 nta-r.1   107797132   uncharacterized LOC107797132 
 nta-r.1   107781079   uncharacterized LOC107781079 
 osa-u.5   4341891   RNA-binding protein L-like 
 zma-u.5   100193418   RNA-binding (RRM/RBD/RNP motifs) family protein 
 tae-r.2   123165987   protein WHI3 
 tae-r.2   123158298   U2 small nuclear ribonucleoprotein B'' 
 tae-r.2   123148888   protein WHI3 
 hvu-r.1   123410026   U2 small nuclear ribonucleoprotein B'' 
 sbi-r.1   8063776   U2 small nuclear ribonucleoprotein B'' 
 bdi-r.1   100834562   U2 small nuclear ribonucleoprotein B'' 

close


Top 50 coexpressed genes to 100799471 (gma-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100799471 (gma-r.7 coexpression data)

CoexMap"100799471"


gmaLOC100799471 | Entrez gene ID : 100799471      
Species gma mtr ppo ath vvi ghi cit sly sot nta osa zma tae hvu sbi bdi bna cre bra
Paralog 4 1 1 1 1 2 1 1 1 2 1 1 3 1 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein XP_003516604.1 [sequence] [blastp]
XP_040872500.1 [sequence] [blastp]
XP_040872502.1 [sequence] [blastp]
XP_040872503.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_003516604.1)
nucl 10  (predict for XP_040872500.1)
nucl 10  (predict for XP_040872502.1)
nucl 10  (predict for XP_040872503.1)
Subcellular
localization
TargetP
other 5  (predict for XP_003516604.1)
other 5  (predict for XP_040872500.1)
other 5  (predict for XP_040872502.1)
other 5  (predict for XP_040872503.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-r.7
for
100799471
gma-u.5
for
100799471
gma-m.5
for
100799471
gma-u.5
for
100780983
mtr-u.5
for
11410894
ppo-u.5
for
7462598
ath-u.5
for
AT2G42240
vvi-u.5
for
100247532
ghi-r.1
for
107913371
ghi-r.1
for
107913223
cit-r.1
for
102623625
sly-u.5
for
101267756
sot-r.1
for
102581347
nta-r.1
for
107797132
nta-r.1
for
107781079
osa-u.5
for
4341891
zma-u.5
for
100193418
tae-r.2
for
123165987
tae-r.2
for
123158298
tae-r.2
for
123148888
hvu-r.1
for
123410026
sbi-r.1
for
8063776
bdi-r.1
for
100834562


Ortholog ID: 11667
Species gma gma mtr ppo ath vvi ghi ghi cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC100799471 LOC100780983 LOC11410894 LOC7462598 AT2G42240 LOC100247532 LOC107913371 LOC107913223 LOC102623625 LOC101267756 LOC102581347 LOC107797132 LOC107781079 LOC4341891 LOC100193418 LOC123165987 LOC123158298 LOC123148888 LOC123410026 LOC8063776 LOC100834562
Function* U1 small nuclear ribonucleoprotein A uncharacterized LOC100780983 U1 small nuclear ribonucleoprotein A RNA-binding protein L RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding protein L RNA-binding protein L RNA-binding protein L uncharacterized LOC102623625 U1 small nuclear ribonucleoprotein A U2 small nuclear ribonucleoprotein B'' uncharacterized LOC107797132 uncharacterized LOC107781079 RNA-binding protein L-like RNA-binding (RRM/RBD/RNP motifs) family protein protein WHI3 U2 small nuclear ribonucleoprotein B'' protein WHI3 U2 small nuclear ribonucleoprotein B'' U2 small nuclear ribonucleoprotein B'' U2 small nuclear ribonucleoprotein B''
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr04712 Circadian rhythm - plant 2
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00790 Folate biosynthesis 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00511 Other glycan degradation 2
ghi00561 Glycerolipid metabolism 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00511 Other glycan degradation 2
ghi00561 Glycerolipid metabolism 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00230 Purine metabolism 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100799471 100780983 11410894 7462598 818824 100247532 107913371 107913223 102623625 101267756 102581347 107797132 107781079 4341891 100193418 123165987 123158298 123148888 123410026 8063776 100834562
The preparation time of this page was 1.3 [sec].