Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8063776   U2 small nuclear ribonucleoprotein B'' 
 zma-u.5   100193418   RNA-binding (RRM/RBD/RNP motifs) family protein 
 osa-u.5   4341891   RNA-binding protein L-like 
 ath-u.5   AT2G42240   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100799471   U1 small nuclear ribonucleoprotein A 
 gma-u.5   100780983   uncharacterized LOC100780983 
 sly-u.5   101267756   U1 small nuclear ribonucleoprotein A 
 vvi-u.5   100247532   RNA-binding protein L 
 ppo-u.5   7462598   RNA-binding protein L 
 mtr-u.5   11410894   U1 small nuclear ribonucleoprotein A 

close


Top 50 coexpressed genes to 8063776 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8063776 (sbi-r.1 coexpression data)

CoexMap"8063776"


sbiLOC8063776 | Entrez gene ID : 8063776      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (267 genes)  IEA  
Protein XP_002437482.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for XP_002437482.1)
Subcellular
localization
TargetP
other 5  (predict for XP_002437482.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8063776

.
zma-u.5
for
100193418

.
osa-u.5
for
4341891

.
ath-u.5
for
AT2G42240

.
gma-u.5
for
100799471

.
gma-u.5
for
100780983

.
sly-u.5
for
101267756

.
vvi-u.5
for
100247532

.
ppo-u.5
for
7462598

.
mtr-u.5
for
11410894

.


Ortholog ID: 11667
Species ath gma gma sly osa zma vvi ppo mtr tae tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol AT2G42240 LOC100780983 LOC100799471 LOC101267756 LOC4341891 LOC100193418 LOC100247532 LOC7462598 LOC11410894 LOC123158298 LOC123165987 LOC123410026 LOC107913223 LOC107913371 LOC8063776 LOC102581347 LOC102623625 LOC100834562 LOC107797132 LOC107781079
Function* RNA-binding (RRM/RBD/RNP motifs) family protein uncharacterized LOC100780983 U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A RNA-binding protein L-like RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding protein L RNA-binding protein L U1 small nuclear ribonucleoprotein A U2 small nuclear ribonucleoprotein B'' protein WHI3 U2 small nuclear ribonucleoprotein B'' RNA-binding protein L RNA-binding protein L U2 small nuclear ribonucleoprotein B'' U2 small nuclear ribonucleoprotein B'' uncharacterized LOC102623625 U2 small nuclear ribonucleoprotein B'' uncharacterized LOC107797132 uncharacterized LOC107781079
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00790 Folate biosynthesis 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr04712 Circadian rhythm - plant 2
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00511 Other glycan degradation 2
ghi00561 Glycerolipid metabolism 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00511 Other glycan degradation 2
ghi00561 Glycerolipid metabolism 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00230 Purine metabolism 3
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818824 100780983 100799471 101267756 4341891 100193418 100247532 7462598 11410894 123158298 123165987 123410026 107913223 107913371 8063776 102581347 102623625 100834562 107797132 107781079
The preparation time of this page was 0.1 [sec].