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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102581347   U2 small nuclear ribonucleoprotein B'' 
 sly-u.5   101267756   U1 small nuclear ribonucleoprotein A 
 ath-u.5   AT2G42240   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100799471   U1 small nuclear ribonucleoprotein A 
 gma-u.5   100780983   uncharacterized LOC100780983 
 vvi-u.5   100247532   RNA-binding protein L 
 ppo-u.5   7462598   RNA-binding protein L 
 mtr-u.5   11410894   U1 small nuclear ribonucleoprotein A 
 osa-u.5   4341891   RNA-binding protein L-like 
 zma-u.5   100193418   RNA-binding (RRM/RBD/RNP motifs) family protein 

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Top 50 coexpressed genes to 102581347 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102581347 (sot-r.1 coexpression data)

CoexMap"102581347"


sotLOC102581347 | Entrez gene ID : 102581347      
Species sot sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi nta cre tae
Paralog 1 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
Protein XP_006339866.1 [sequence] [blastp]
XP_006339867.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_006339866.1)
nucl 9  (predict for XP_006339867.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006339866.1)
other 8  (predict for XP_006339867.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102581347
sly-u.5
for
101267756
ath-u.5
for
AT2G42240
gma-u.5
for
100799471
gma-u.5
for
100780983
vvi-u.5
for
100247532
ppo-u.5
for
7462598
mtr-u.5
for
11410894
osa-u.5
for
4341891
zma-u.5
for
100193418


Ortholog ID: 11667
Species sot sly nta nta ath gma gma vvi ppo mtr ghi ghi cit osa zma tae tae hvu sbi bdi
Symbol LOC102581347 LOC101267756 LOC107797132 LOC107781079 AT2G42240 LOC100780983 LOC100799471 LOC100247532 LOC7462598 LOC11410894 LOC107913223 LOC107913371 LOC102623625 LOC4341891 LOC100193418 LOC123158298 LOC123165987 LOC123410026 LOC8063776 LOC100834562
Function* U2 small nuclear ribonucleoprotein B'' U1 small nuclear ribonucleoprotein A uncharacterized LOC107797132 uncharacterized LOC107781079 RNA-binding (RRM/RBD/RNP motifs) family protein uncharacterized LOC100780983 U1 small nuclear ribonucleoprotein A RNA-binding protein L RNA-binding protein L U1 small nuclear ribonucleoprotein A RNA-binding protein L RNA-binding protein L uncharacterized LOC102623625 RNA-binding protein L-like RNA-binding (RRM/RBD/RNP motifs) family protein U2 small nuclear ribonucleoprotein B'' protein WHI3 U2 small nuclear ribonucleoprotein B'' U2 small nuclear ribonucleoprotein B'' U2 small nuclear ribonucleoprotein B''
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00230 Purine metabolism 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00790 Folate biosynthesis 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr04712 Circadian rhythm - plant 2
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00511 Other glycan degradation 2
ghi00561 Glycerolipid metabolism 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00511 Other glycan degradation 2
ghi00561 Glycerolipid metabolism 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102581347 101267756 107797132 107781079 818824 100780983 100799471 100247532 7462598 11410894 107913223 107913371 102623625 4341891 100193418 123158298 123165987 123410026 8063776 100834562
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