ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	ZTL	adagio protein 1
gma-r.7	ZTL	adagio protein 1
gma-u.5	ZTL1	PAS protein ZEITLUPE 1
gma-u.5	FKF1	circadian clock-associated FKF1
gma-u.5	100805523	adagio protein 1
mtr-u.5	11445386	adagio protein 1
mtr-u.5	11417024	adagio protein 3
ppo-u.5	18100482	adagio protein 1
ppo-u.5	7482913	adagio protein 3
ppo-u.5	7459749	adagio protein 3
ath-u.5	LKP2	LOV KELCH protein 2
ath-u.5	ZTL	Galactose oxidase/kelch repeat superfamily protein
ath-u.5	FKF1	flavin-binding, kelch repeat, f box 1
bra-r.6	103828355	adagio protein 2
bra-r.6	103828354	adagio protein 2
bra-r.6	103828356	adagio protein 2
vvi-u.5	100244508	adagio protein 1
vvi-u.5	100255972	adagio protein 3
vvi-u.5	100249144	adagio protein 1
ghi-r.1	107926267	adagio protein 1
ghi-r.1	107922146	adagio protein 3
ghi-r.1	107946295	adagio protein 3
bna-r.1	106435341	adagio protein 2
bna-r.1	106357634	adagio protein 2-like
bna-r.1	106433001	adagio protein 2-like
cit-r.1	102630709	adagio protein 3
cit-r.1	102613944	adagio protein 1
sly-u.5	101262932	adagio protein 1
sly-u.5	101256908	adagio protein 3
sot-r.1	102593553	adagio protein 3
sot-r.1	102583269	adagio protein 1-like
nta-r.1	107775221	adagio protein 1
nta-r.1	107774540	adagio protein 3
nta-r.1	107786372	adagio protein 1
osa-u.5	4350698	adagio-like protein 3
osa-u.5	4341923	adagio-like protein 1
osa-u.5	4328313	putative adagio-like protein 2
zma-u.5	103626364	adagio-like protein 1
zma-u.5	100279726	Adagio protein 3
zma-u.5	103626626	putative adagio-like protein 2
tae-r.2	123132267	putative adagio-like protein 2
tae-r.2	123148788	adagio-like protein 1
tae-r.2	123143828	putative adagio-like protein 2
hvu-r.1	123448527	adagio-like protein 3
hvu-r.1	123407075	adagio-like protein 1
hvu-r.1	123406339	putative adagio-like protein 2
sbi-r.1	8074643	putative adagio-like protein 2
sbi-r.1	8065120	adagio-like protein 1
sbi-r.1	8057016	adagio-like protein 3
bdi-r.1	100832311	adagio-like protein 1
bdi-r.1	100845844	adagio-like protein 3
bdi-r.1	100836271	putative adagio-like protein 2

Top 50 coexpressed genes to ZTL (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to ZTL (gma-u.5 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

adagio protein 1

KEGG

gmx04712 [list] [network] Circadian rhythm - plant (105 genes)

GO BP

GO:0007623 [list] [network] circadian rhythm	(25 genes)	IEA
GO:0009637 [list] [network] response to blue light	(30 genes)	IEA

GO CC

GO:0019005 [list] [network] SCF ubiquitin ligase complex	(101 genes)	IEA
GO:0005829 [list] [network] cytosol	(1702 genes)	IEA
GO:0005634 [list] [network] nucleus	(5531 genes)	IEA

GO MF

GO:0005515 [list] [network] protein binding

(7243 genes)

IEA

Protein

XP_003546409.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto_nucl 4, cyto 1

(predict for XP_003546409.1)

Subcellular
localization
TargetP

other 9

(predict for XP_003546409.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for ZTL	gma-r.7 for ZTL	gma-u.5 for ZTL1	gma-u.5 for FKF1	gma-u.5 for 100805523	mtr-u.5 for 11445386	mtr-u.5 for 11417024	ppo-u.5 for 18100482	ppo-u.5 for 7482913	ppo-u.5 for 7459749	ath-u.5 for LKP2	ath-u.5 for ZTL	ath-u.5 for FKF1	bra-r.6 for 103828355	bra-r.6 for 103828354	bra-r.6 for 103828356	vvi-u.5 for 100244508	vvi-u.5 for 100255972	vvi-u.5 for 100249144	ghi-r.1 for 107926267	ghi-r.1 for 107922146	ghi-r.1 for 107946295	bna-r.1 for 106435341	bna-r.1 for 106357634	bna-r.1 for 106433001	cit-r.1 for 102630709	cit-r.1 for 102613944	sly-u.5 for 101262932	sly-u.5 for 101256908	sot-r.1 for 102593553	sot-r.1 for 102583269	nta-r.1 for 107775221	nta-r.1 for 107774540	nta-r.1 for 107786372	osa-u.5 for 4350698	osa-u.5 for 4341923	osa-u.5 for 4328313	zma-u.5 for 103626364	zma-u.5 for 100279726	zma-u.5 for 103626626	tae-r.2 for 123132267	tae-r.2 for 123148788	tae-r.2 for 123143828	hvu-r.1 for 123448527	hvu-r.1 for 123407075	hvu-r.1 for 123406339	sbi-r.1 for 8074643	sbi-r.1 for 8065120	sbi-r.1 for 8057016	bdi-r.1 for 100832311	bdi-r.1 for 100845844	bdi-r.1 for 100836271

Please wait a moment.

Ortholog

Ortholog ID: 2012

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

ZTL

ZTL1

ZTL2

LKP2

ZTL

FKF1

Function^*

adagio protein 1

PAS protein ZEITLUPE 1

clock-associated PAS protein ZEITLUPE 2

adagio protein 1

adagio protein 3

adagio protein 1

adagio protein 3

LOV KELCH protein 2

Galactose oxidase/kelch repeat superfamily protein

flavin-binding, kelch repeat, f box 1

adagio protein 2

adagio protein 1

adagio protein 3

adagio protein 1

adagio protein 3

adagio protein 1

adagio protein 2

adagio protein 2-like

adagio protein 3

adagio protein 1

adagio protein 3

adagio protein 1-like

adagio protein 3

adagio protein 1

adagio protein 3

adagio-like protein 3

adagio-like protein 1

putative adagio-like protein 2

adagio-like protein 1

uncharacterized LOC100383277

putative adagio-like protein 2

adagio-like protein 1

adagio-like protein 3

adagio-like protein 1

putative adagio-like protein 2

adagio-like protein 1

adagio-like protein 3

adagio-like protein 1

adagio-like protein 3

putative adagio-like protein 2

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	4
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	4
gma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	7
gma04712	Circadian rhythm - plant	4
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	2
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00310	Lysine degradation	2
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04712	Circadian rhythm - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04712	Circadian rhythm - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	3
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	4
nta00970	Aminoacyl-tRNA biosynthesis	2
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	2
nta03015	mRNA surveillance pathway	2
nta04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	4
nta00970	Aminoacyl-tRNA biosynthesis	2
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	4
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	3
zma03013	Nucleocytoplasmic transport	2
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	5
tae00061	Fatty acid biosynthesis	3
tae01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04712	Circadian rhythm - plant	3
sbi01240	Biosynthesis of cofactors	2
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04712	Circadian rhythm - plant	2
sbi04016	MAPK signaling pathway - plant	2
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04712	Circadian rhythm - plant	3
sbi00730	Thiamine metabolism	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	6
bdi01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

100802828

100301887

100301888

11445386

11417024

18100482

7482913

7459749

816408

835842

843133

103828355

103828354

103828356

100244508

100255972

100249144

107946295

107918113

107907349

106435341

106357633

106357632

102630709

102613944

101262932

101256908

102593553

102583269

107774540

107786372

107783380

4350698

4341923

4328313

103626364

103629610

100383277

123132267

123168584

100127072

123448527

123407075

123406339

8074643

8065120

8057016

100832311

100845844

100836271

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	2	3	3	3	3	3	3	2	2	2	3	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to ZTL (gma-u.5 coexpression data)

Top 50 enrichment test to ZTL (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**