ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100244508	adagio protein 1
vvi-r.5	100244508	adagio protein 1
vvi-m.5	100244508	adagio protein 1
vvi-u.5	100249144	adagio protein 1
vvi-u.5	100255972	adagio protein 3
ath-u.5	LKP2	LOV KELCH protein 2
ath-u.5	ZTL	Galactose oxidase/kelch repeat superfamily protein
ath-u.5	FKF1	flavin-binding, kelch repeat, f box 1
gma-u.5	100812253	adagio protein 3
gma-u.5	100805523	adagio protein 1
gma-u.5	ZTL	adagio protein 1
bra-r.6	103828356	adagio protein 2
bra-r.6	103828354	adagio protein 2
bra-r.6	103828355	adagio protein 2
ppo-u.5	7482913	adagio protein 3
ppo-u.5	7488958	adagio protein 1
ppo-u.5	7459749	adagio protein 3
mtr-u.5	11445386	adagio protein 1
mtr-u.5	11417024	adagio protein 3
ghi-r.1	107907349	adagio protein 1
ghi-r.1	107907495	adagio protein 1
ghi-r.1	107918113	adagio protein 3
bna-r.1	106357633	adagio protein 2-like
bna-r.1	106435341	adagio protein 2
bna-r.1	106357632	adagio protein 2-like
cit-r.1	102613944	adagio protein 1
cit-r.1	102630709	adagio protein 3
sly-u.5	101262932	adagio protein 1
sly-u.5	101256908	adagio protein 3
sot-r.1	102593553	adagio protein 3
sot-r.1	102583269	adagio protein 1-like
nta-r.1	107786372	adagio protein 1
nta-r.1	107774540	adagio protein 3
nta-r.1	107775221	adagio protein 1
osa-u.5	4350698	adagio-like protein 3
osa-u.5	4341923	adagio-like protein 1
osa-u.5	4328313	putative adagio-like protein 2
zma-u.5	100279726	Adagio protein 3
zma-u.5	103626364	adagio-like protein 1
zma-u.5	103626626	putative adagio-like protein 2
tae-r.2	100127072	adagio-like protein 3
tae-r.2	123143828	putative adagio-like protein 2
tae-r.2	123132267	putative adagio-like protein 2
hvu-r.1	123407075	adagio-like protein 1
hvu-r.1	123448527	adagio-like protein 3
hvu-r.1	123406339	putative adagio-like protein 2
sbi-r.1	8057016	adagio-like protein 3
sbi-r.1	8074643	putative adagio-like protein 2
sbi-r.1	8065120	adagio-like protein 1
bdi-r.1	100832311	adagio-like protein 1
bdi-r.1	100845844	adagio-like protein 3
bdi-r.1	100836271	putative adagio-like protein 2

Top 50 coexpressed genes to 100244508 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100244508 (vvi-u.5 coexpression data)

CoexMap"100244508"

[Cytoscape]

Annotation

functional annotation

KEGG

vvi04712 [list] [network] Circadian rhythm - plant (44 genes)

GO BP

GO:0007623 [list] [network] circadian rhythm	(9 genes)	IEA
GO:0009637 [list] [network] response to blue light	(11 genes)	IEA

GO CC

GO:0019005 [list] [network] SCF ubiquitin ligase complex	(51 genes)	IEA
GO:0005829 [list] [network] cytosol	(779 genes)	IEA
GO:0005634 [list] [network] nucleus	(2597 genes)	IEA

GO MF

GO:0005515 [list] [network] protein binding

(4232 genes)

IEA

Protein

XP_002269105.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto_nucl 4, cyto 1

(predict for XP_002269105.1)

Subcellular
localization
TargetP

other 9

(predict for XP_002269105.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100244508	vvi-r.5 for 100244508	vvi-m.5 for 100244508	vvi-u.5 for 100249144	vvi-u.5 for 100255972	ath-u.5 for LKP2	ath-u.5 for ZTL	ath-u.5 for FKF1	gma-u.5 for 100812253	gma-u.5 for 100805523	gma-u.5 for ZTL	bra-r.6 for 103828356	bra-r.6 for 103828354	bra-r.6 for 103828355	ppo-u.5 for 7482913	ppo-u.5 for 7488958	ppo-u.5 for 7459749	mtr-u.5 for 11445386	mtr-u.5 for 11417024	ghi-r.1 for 107907349	ghi-r.1 for 107907495	ghi-r.1 for 107918113	bna-r.1 for 106357633	bna-r.1 for 106435341	bna-r.1 for 106357632	cit-r.1 for 102613944	cit-r.1 for 102630709	sly-u.5 for 101262932	sly-u.5 for 101256908	sot-r.1 for 102593553	sot-r.1 for 102583269	nta-r.1 for 107786372	nta-r.1 for 107774540	nta-r.1 for 107775221	osa-u.5 for 4350698	osa-u.5 for 4341923	osa-u.5 for 4328313	zma-u.5 for 100279726	zma-u.5 for 103626364	zma-u.5 for 103626626	tae-r.2 for 100127072	tae-r.2 for 123143828	tae-r.2 for 123132267	hvu-r.1 for 123407075	hvu-r.1 for 123448527	hvu-r.1 for 123406339	sbi-r.1 for 8057016	sbi-r.1 for 8074643	sbi-r.1 for 8065120	bdi-r.1 for 100832311	bdi-r.1 for 100845844	bdi-r.1 for 100836271

Ortholog

Ortholog ID: 2012

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

LOC100244508

LOC100249144

LOC100255972

LKP2

ZTL

FKF1

ZTL

ZTL1

ZTL2

Function^*

adagio protein 1

adagio protein 3

LOV KELCH protein 2

Galactose oxidase/kelch repeat superfamily protein

flavin-binding, kelch repeat, f box 1

adagio protein 1

PAS protein ZEITLUPE 1

clock-associated PAS protein ZEITLUPE 2

adagio protein 2

adagio protein 3

adagio protein 1

adagio protein 3

adagio protein 1

adagio protein 3

adagio protein 2-like

adagio protein 2

adagio protein 2-like

adagio protein 1

adagio protein 3

adagio protein 1

adagio protein 3

adagio protein 1-like

adagio protein 1

adagio protein 3

adagio-like protein 3

adagio-like protein 1