ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
hvu-r.1	123406339	putative adagio-like protein 2
hvu-r.1	123407075	adagio-like protein 1
hvu-r.1	123448527	adagio-like protein 3
tae-r.2	123143828	putative adagio-like protein 2
tae-r.2	123132267	putative adagio-like protein 2
tae-r.2	123148788	adagio-like protein 1
bdi-r.1	100836271	putative adagio-like protein 2
bdi-r.1	100845844	adagio-like protein 3
bdi-r.1	100832311	adagio-like protein 1
osa-u.5	4328313	putative adagio-like protein 2
osa-u.5	4341923	adagio-like protein 1
osa-u.5	4350698	adagio-like protein 3
zma-u.5	103629610	adagio-like protein 1
zma-u.5	100279726	Adagio protein 3
zma-u.5	100383277	uncharacterized LOC100383277
sbi-r.1	8074643	putative adagio-like protein 2
sbi-r.1	8065120	adagio-like protein 1
sbi-r.1	8057016	adagio-like protein 3
ath-u.5	LKP2	LOV KELCH protein 2
ath-u.5	ZTL	Galactose oxidase/kelch repeat superfamily protein
ath-u.5	FKF1	flavin-binding, kelch repeat, f box 1
gma-u.5	ZTL2	clock-associated PAS protein ZEITLUPE 2
gma-u.5	ZTL1	PAS protein ZEITLUPE 1
gma-u.5	ZTL	adagio protein 1
sly-u.5	101262932	adagio protein 1
sly-u.5	101256908	adagio protein 3
bra-r.6	103828354	adagio protein 2
bra-r.6	103828355	adagio protein 2
bra-r.6	103828356	adagio protein 2
vvi-u.5	100244508	adagio protein 1
vvi-u.5	100255972	adagio protein 3
vvi-u.5	100249144	adagio protein 1
ppo-u.5	7459749	adagio protein 3
ppo-u.5	7488958	adagio protein 1
ppo-u.5	18100482	adagio protein 1
mtr-u.5	11417024	adagio protein 3
mtr-u.5	11445386	adagio protein 1
ghi-r.1	107919516	adagio protein 1
ghi-r.1	107922146	adagio protein 3
ghi-r.1	107926267	adagio protein 1
bna-r.1	106433001	adagio protein 2-like
bna-r.1	106435341	adagio protein 2
bna-r.1	106357633	adagio protein 2-like
sot-r.1	102583269	adagio protein 1-like
sot-r.1	102593553	adagio protein 3
cit-r.1	102630709	adagio protein 3
cit-r.1	102613944	adagio protein 1
nta-r.1	107786372	adagio protein 1
nta-r.1	107774540	adagio protein 3
nta-r.1	107783380	adagio protein 3

Top 50 coexpressed genes to 123406339 (hvu-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123406339 (hvu-r.1 coexpression data)

CoexMap"123406339"

[Cytoscape]

Annotation

functional annotation

KEGG

hvg04712 [list] [network] Circadian rhythm - plant (64 genes)

GO BP

GO:0007623 [list] [network] circadian rhythm	(11 genes)	IEA
GO:0009637 [list] [network] response to blue light	(11 genes)	IEA

GO CC

GO:0019005 [list] [network] SCF ubiquitin ligase complex	(48 genes)	IEA
GO:0005829 [list] [network] cytosol	(938 genes)	IEA
GO:0005634 [list] [network] nucleus	(3241 genes)	IEA

GO MF

GO:0005515 [list] [network] protein binding

(4692 genes)

IEA

Protein

XP_044955771.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, cyto_nucl 4, nucl 2, E.R. 1, chlo 1, vacu 1, cysk 1, E.R._plas 1

(predict for XP_044955771.1)

Subcellular
localization
TargetP

other 9

(predict for XP_044955771.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123406339	hvu-r.1 for 123407075	hvu-r.1 for 123448527	tae-r.2 for 123143828	tae-r.2 for 123132267	tae-r.2 for 123148788	bdi-r.1 for 100836271	bdi-r.1 for 100845844	bdi-r.1 for 100832311	osa-u.5 for 4328313	osa-u.5 for 4341923	osa-u.5 for 4350698	zma-u.5 for 103629610	zma-u.5 for 100279726	zma-u.5 for 100383277	sbi-r.1 for 8074643	sbi-r.1 for 8065120	sbi-r.1 for 8057016	ath-u.5 for LKP2	ath-u.5 for ZTL	ath-u.5 for FKF1	gma-u.5 for ZTL2	gma-u.5 for ZTL1	gma-u.5 for ZTL	sly-u.5 for 101262932	sly-u.5 for 101256908	bra-r.6 for 103828354	bra-r.6 for 103828355	bra-r.6 for 103828356	vvi-u.5 for 100244508	vvi-u.5 for 100255972	vvi-u.5 for 100249144	ppo-u.5 for 7459749	ppo-u.5 for 7488958	ppo-u.5 for 18100482	mtr-u.5 for 11417024	mtr-u.5 for 11445386	ghi-r.1 for 107919516	ghi-r.1 for 107922146	ghi-r.1 for 107926267	bna-r.1 for 106433001	bna-r.1 for 106435341	bna-r.1 for 106357633	sot-r.1 for 102583269	sot-r.1 for 102593553	cit-r.1 for 102630709	cit-r.1 for 102613944	nta-r.1 for 107786372	nta-r.1 for 107774540	nta-r.1 for 107783380

Ortholog

Ortholog ID: 2012

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

LKP2

ZTL

FKF1

ZTL2

ZTL1

ZTL

Function^*