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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100807173   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 gma-r.7   100807173   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 gma-u.5   100806216   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 ppo-u.5   18094493   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 ath-u.5   RARE1   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103846587   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 vvi-u.5   100260840   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 ghi-r.1   107928792   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 ghi-r.1   121213696   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 bna-r.1   106372305   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 bna-r.1   111201492   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 

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Top 50 coexpressed genes to 100807173 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100807173 (gma-u.5 coexpression data)

CoexMap"100807173"


gmaLOC100807173 | Entrez gene ID : 100807173    
Species gma ppo ath bra vvi ghi bna sbi osa sot sly cit mtr tae hvu zma cre nta bdi
Paralog 3 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003538651.1 [sequence] [blastp]
XP_014619230.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003538651.1)
chlo 4,  cyto 3,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_014619230.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003538651.1)
other 8  (predict for XP_014619230.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100807173
gma-r.7
for
100807173
gma-u.5
for
100806216
ppo-u.5
for
18094493
ath-u.5
for
RARE1
bra-r.6
for
103846587
vvi-u.5
for
100260840
ghi-r.1
for
107928792
ghi-r.1
for
121213696
bna-r.1
for
106372305
bna-r.1
for
111201492


Ortholog ID: 15224
Species gma gma ppo ath bra vvi ghi ghi bna bna
Symbol LOC100807173 LOC100806216 LOC18094493 RARE1 LOC103846587 LOC100260840 LOC107928792 LOC121213696 LOC106372305 LOC111201492
Function* pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100807173 100806216 18094493 831168 103846587 100260840 107928792 121213696 106372305 111201492
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