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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18094493   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 ppo-r.4   18094493   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 gma-u.5   100806216   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 gma-u.5   100807173   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 ath-u.5   RARE1   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103846587   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 vvi-u.5   100260840   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 ghi-r.1   107928792   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 ghi-r.1   121213696   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 bna-r.1   106372305   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 bna-r.1   111201492   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 

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Top 50 coexpressed genes to 18094493 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18094493 (ppo-u.5 coexpression data)

CoexMap""


ppoLOC18094493 | Entrez gene ID : 18094493    
Species ppo gma ath bra vvi ghi bna tae nta bdi cit sot sly hvu osa sbi mtr zma cre
Paralog 2 2 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function pentatricopeptide repeat-containing protein At5g13270, chloroplastic
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024448821.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  mito 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_024448821.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_024448821.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18094493
ppo-r.4
for
18094493
gma-u.5
for
100806216
gma-u.5
for
100807173
ath-u.5
for
RARE1
bra-r.6
for
103846587
vvi-u.5
for
100260840
ghi-r.1
for
107928792
ghi-r.1
for
121213696
bna-r.1
for
106372305
bna-r.1
for
111201492

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Ortholog ID: 15224
Species ppo gma gma ath bra vvi ghi ghi bna bna
Symbol LOC18094493 LOC100806216 LOC100807173 RARE1 LOC103846587 LOC100260840 LOC107928792 LOC121213696 LOC106372305 LOC111201492
Function* pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18094493 100806216 100807173 831168 103846587 100260840 107928792 121213696 106372305 111201492
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