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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5  18094493  pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 ppo-r.4  18094493  pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 gma-u.5  100806216  pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 gma-u.5  100807173  pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 ath-u.5  RARE1  Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5  100260840  pentatricopeptide repeat-containing protein At5g13270, chloroplastic 

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Top 50 coexpressed genes to 18094493 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18094493 (ppo-u.5 coexpression data)

CoexMap"18094493"


ppoLOC18094493 | Entrez gene ID : 18094493
Species ppo gma ath vvi sly sbi nta mtr osa cre cit bra hvu bdi sot zma tae bna ghi
Paralog 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024448821.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  mito 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_024448821.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_024448821.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ppo-u.5
for
18094493

.

ppo-r.4
for
18094493

.

gma-u.5
for
100806216

.

gma-u.5
for
100807173

.

ath-u.5
for
RARE1

.

vvi-u.5
for
100260840

.


Ortholog ID: 15224
Species ath gma gma bra vvi ppo ghi ghi bna bna
Symbol RARE1 LOC100807173 LOC100806216 LOC103846587 LOC100260840 LOC18094493 LOC121213696 LOC107928792 LOC106372305 LOC111201492
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831168 100807173 100806216 103846587 100260840 18094493 121213696 107928792 106372305 111201492
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