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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111201492   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 bna-r.1   106372305   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 bra-r.6   103846587   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 ath-u.5   RARE1   Pentatricopeptide repeat (PPR) superfamily protein 
 ghi-r.1   107928792   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 ghi-r.1   121213696   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 gma-u.5   100806216   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 gma-u.5   100807173   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 vvi-u.5   100260840   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 
 ppo-u.5   18094493   pentatricopeptide repeat-containing protein At5g13270, chloroplastic 

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Top 50 coexpressed genes to 111201492 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111201492 (bna-r.1 coexpression data)

CoexMap""


bnaLOC111201492 | Entrez gene ID : 111201492    
Species bna bra ath ghi gma vvi ppo tae nta bdi cit sot sly hvu osa sbi mtr zma cre
Paralog 2 1 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function pentatricopeptide repeat-containing protein At5g13270, chloroplastic
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_022549291.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo 3,  nucl 1  (predict for XP_022549291.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_022549291.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
111201492


bna-r.1
for
106372305


bra-r.6
for
103846587


ath-u.5
for
RARE1


ghi-r.1
for
107928792


ghi-r.1
for
121213696


gma-u.5
for
100806216


gma-u.5
for
100807173


vvi-u.5
for
100260840


ppo-u.5
for
18094493

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Ortholog ID: 15224
Species bna bna bra ath ghi ghi gma gma vvi ppo
Symbol LOC111201492 LOC106372305 LOC103846587 RARE1 LOC107928792 LOC121213696 LOC100806216 LOC100807173 LOC100260840 LOC18094493
Function* pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic pentatricopeptide repeat-containing protein At5g13270, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111201492 106372305 103846587 831168 107928792 121213696 100806216 100807173 100260840 18094493
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