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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-r.5   11436008   pentatricopeptide repeat-containing protein At5g27110 
 mtr-u.5   11436008   pentatricopeptide repeat-containing protein At5g27110 
 gma-u.5   100817231   pentatricopeptide repeat-containing protein At5g27110 
 gma-u.5   100819187   pentatricopeptide repeat-containing protein At5g27110 
 ath-u.5   AT5G27110   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   104878995   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 vvi-u.5   100246628   pentatricopeptide repeat-containing protein At5g27110 
 ghi-r.1   107938359   pentatricopeptide repeat-containing protein At5g27110 
 cit-r.1   102612538   pentatricopeptide repeat-containing protein At5g27110 
 sly-u.5   101257516   pentatricopeptide repeat-containing protein At5g27110 
 sot-r.1   102600898   pentatricopeptide repeat-containing protein At5g27110 
 nta-r.1   142178834   pentatricopeptide repeat-containing protein At5g27110-like 
 osa-u.5   4325920   pentatricopeptide repeat-containing protein At3g22690 
 bdi-r.1   100837674   pentatricopeptide repeat-containing protein At3g22690 

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Top 50 coexpressed genes to 11436008 (mtr-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11436008 (mtr-r.5 coexpression data)

CoexMap"11436008"


mtrLOC11436008 | Entrez gene ID : 11436008      
Species mtr gma ath vvi ghi cit sly sot nta osa bdi sbi bra tae bna hvu ppo zma cre
Paralog 2 2 1 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003588887.1 [sequence] [blastp]
XP_024631045.1 [sequence] [blastp]
XP_024631046.1 [sequence] [blastp]
XP_024631047.1 [sequence] [blastp]
XP_039688119.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1  (predict for XP_003588887.1)
chlo 4,  cyto 4,  nucl 1  (predict for XP_024631045.1)
chlo 4,  cyto 4,  nucl 1  (predict for XP_024631046.1)
chlo 4,  cyto 4,  nucl 1  (predict for XP_024631047.1)
chlo 4,  cyto 4,  nucl 1  (predict for XP_039688119.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_003588887.1)
other 5,  mito 4  (predict for XP_024631045.1)
other 5,  mito 4  (predict for XP_024631046.1)
other 5,  mito 4  (predict for XP_024631047.1)
other 5,  mito 4  (predict for XP_039688119.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-r.5
for
11436008
mtr-u.5
for
11436008
gma-u.5
for
100817231
gma-u.5
for
100819187
ath-u.5
for
AT5G27110
vvi-u.5
for
104878995
vvi-u.5
for
100246628
ghi-r.1
for
107938359
cit-r.1
for
102612538
sly-u.5
for
101257516
sot-r.1
for
102600898
nta-r.1
for
142178834
osa-u.5
for
4325920
bdi-r.1
for
100837674


Ortholog ID: 12677
Species mtr gma gma ath vvi vvi ghi cit sly sot nta osa bdi
Symbol LOC11436008 LOC100817231 LOC100819187 AT5G27110 LOC104878995 LOC100246628 LOC107938359 LOC102612538 LOC101257516 LOC102600898 LOC142178834 LOC4325920 LOC100837674
Function* pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110-like pentatricopeptide repeat-containing protein At3g22690 pentatricopeptide repeat-containing protein At3g22690
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11436008 100817231 100819187 832769 104878995 100246628 107938359 102612538 101257516 102600898 142178834 4325920 100837674
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