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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5  101257516  pentatricopeptide repeat-containing protein At5g27110 
 sly-r.6  101257516  pentatricopeptide repeat-containing protein At5g27110 
 ath-u.5  AT5G27110  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100819187  pentatricopeptide repeat-containing protein At5g27110 
 gma-u.5  100817231  pentatricopeptide repeat-containing protein At5g27110 
 vvi-u.5  100246628  pentatricopeptide repeat-containing protein At5g27110 
 vvi-u.5  104878995  pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 mtr-u.5  11436008  pentatricopeptide repeat-containing protein At5g27110 
 osa-u.5  4325920  pentatricopeptide repeat-containing protein At3g22690 

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Top 50 coexpressed genes to 101257516 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101257516 (sly-u.5 coexpression data)

CoexMap"101257516"


slyLOC101257516 | Entrez gene ID : 101257516
Species sly ath gma vvi mtr osa sbi nta bra cre hvu cit bdi ppo sot zma tae bna ghi
Paralog 2 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_010315549.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 3,  mito 2,  cyto_nucl 2  (predict for XP_010315549.2)
Subcellular
localization
TargetP
other 3  (predict for XP_010315549.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sly-u.5
for
101257516

.

sly-r.6
for
101257516

.

ath-u.5
for
AT5G27110

.

gma-u.5
for
100819187

.

gma-u.5
for
100817231

.

vvi-u.5
for
100246628

.

vvi-u.5
for
104878995

.

mtr-u.5
for
11436008

.

osa-u.5
for
4325920

.


Ortholog ID: 12677
Species ath gma gma sly osa vvi vvi mtr ghi sot cit bdi nta
Symbol AT5G27110 LOC100817231 LOC100819187 LOC101257516 LOC4325920 LOC100246628 LOC104878995 LOC11436008 LOC107938359 LOC102600898 LOC102612538 LOC100837674 LOC142178834
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At3g22690 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At3g22690 pentatricopeptide repeat-containing protein At5g27110-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832769 100817231 100819187 101257516 4325920 100246628 104878995 11436008 107938359 102600898 102612538 100837674 142178834
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