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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11443262   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 mtr-r.5   11443262   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 mtr-m.5   11443262   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 gma-u.5   100777321   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 ppo-u.5   7495762   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 ath-u.5   LOJ   LATERAL ORGAN JUNCTION 
 ath-u.5   AT3G54980   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103841410   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 vvi-u.5   100259391   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 ghi-r.1   107914253   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 ghi-r.1   107897594   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 bna-r.1   106439871   pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like 
 bna-r.1   106412116   pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like 
 cit-r.1   102609583   pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like 
 sly-u.5   101252311   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 sot-r.1   102596962   pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like 
 nta-r.1   107827183   uncharacterized LOC107827183 
 nta-r.1   107829376   uncharacterized LOC107829376 
 nta-r.1   107777250   uncharacterized LOC107777250 

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Top 50 coexpressed genes to 11443262 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11443262 (mtr-u.5 coexpression data)

CoexMap"11443262"


mtrLOC11443262 | Entrez gene ID : 11443262    
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta cre hvu tae bdi osa zma sbi
Paralog 3 1 1 2 1 1 2 2 1 1 1 3 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (294 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003607325.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  mito 1,  plas 1,  vacu 1,  cyto_nucl 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_003607325.1)
Subcellular
localization
TargetP
other 4  (predict for XP_003607325.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11443262
mtr-r.5
for
11443262
mtr-m.5
for
11443262
gma-u.5
for
100777321
ppo-u.5
for
7495762
ath-u.5
for
LOJ
ath-u.5
for
AT3G54980
bra-r.6
for
103841410
vvi-u.5
for
100259391
ghi-r.1
for
107914253
ghi-r.1
for
107897594
bna-r.1
for
106439871
bna-r.1
for
106412116
cit-r.1
for
102609583
sly-u.5
for
101252311
sot-r.1
for
102596962
nta-r.1
for
107827183
nta-r.1
for
107829376
nta-r.1
for
107777250


Ortholog ID: 12645
Species mtr gma ppo ath ath bra vvi ghi ghi bna bna cit sly sot nta nta nta
Symbol LOC11443262 LOC100777321 LOC7495762 LOJ AT3G54980 LOC103841410 LOC100259391 LOC107914253 LOC107897594 LOC106439871 LOC106412116 LOC102609583 LOC101252311 LOC102596962 LOC107827183 LOC107829376 LOC107777250
Function* pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial LATERAL ORGAN JUNCTION Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like uncharacterized LOC107827183 uncharacterized LOC107829376 uncharacterized LOC107777250
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11443262 100777321 7495762 818508 824663 103841410 100259391 107914253 107897594 106439871 106412116 102609583 101252311 102596962 107827183 107829376 107777250
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