Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101252311   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 sly-r.6   101252311   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 ath-u.5   LOJ   LATERAL ORGAN JUNCTION 
 ath-u.5   AT3G54980   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100777321   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 vvi-u.5   100259391   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 ppo-u.5   7495762   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 mtr-u.5   11443262   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 

close


Top 50 coexpressed genes to 101252311 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 101252311 (sly-u.5 coexpression data)

CoexMap"101252311"


slyLOC101252311 | Entrez gene ID : 101252311      
Species sly ath gma vvi ppo mtr hvu zma bna cit bra ghi osa sbi bdi nta tae cre sot
Paralog 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004245400.1 [sequence] [blastp]
XP_010325116.1 [sequence] [blastp]
XP_010325118.1 [sequence] [blastp]
XP_019070822.1 [sequence] [blastp]
XP_025888100.1 [sequence] [blastp]
XP_025888101.1 [sequence] [blastp]
XP_025888102.1 [sequence] [blastp]
XP_069144252.1 [sequence] [blastp]
XP_069144253.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 1,  mito 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_004245400.1)
chlo 6,  cyto 1,  mito 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_010325116.1)
chlo 6,  cyto 1,  mito 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_010325118.1)
chlo 6,  cyto 1,  mito 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_019070822.1)
chlo 6,  cyto 1,  mito 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_025888100.1)
chlo 6,  cyto 1,  mito 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_025888101.1)
chlo 6,  cyto 1,  mito 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_025888102.1)
chlo 6,  cyto 1,  mito 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_069144252.1)
chlo 6,  cyto 1,  mito 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_069144253.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_004245400.1)
chlo 6  (predict for XP_010325116.1)
chlo 6  (predict for XP_010325118.1)
chlo 6  (predict for XP_019070822.1)
chlo 6  (predict for XP_025888100.1)
chlo 6  (predict for XP_025888101.1)
chlo 6  (predict for XP_025888102.1)
chlo 6  (predict for XP_069144252.1)
chlo 6  (predict for XP_069144253.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101252311
sly-r.6
for
101252311
ath-u.5
for
LOJ
ath-u.5
for
AT3G54980
gma-u.5
for
100777321
vvi-u.5
for
100259391
ppo-u.5
for
7495762
mtr-u.5
for
11443262


Ortholog ID: 12645
Species sly sot nta nta ath ath gma bra vvi ppo mtr ghi bna bna cit
Symbol LOC101252311 LOC102596962 LOC107829376 LOC107777250 LOJ AT3G54980 LOC100777321 LOC103841410 LOC100259391 LOC7495762 LOC11443262 LOC107914253 LOC106412116 LOC106439871 LOC102609583
Function* pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like uncharacterized LOC107829376 uncharacterized LOC107777250 LATERAL ORGAN JUNCTION Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101252311 102596962 107829376 107777250 818508 824663 100777321 103841410 100259391 7495762 11443262 107914253 106412116 106439871 102609583
The preparation time of this page was 0.1 [sec].