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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102609583   pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like 
 ath-u.5   LOJ   LATERAL ORGAN JUNCTION 
 ath-u.5   AT3G54980   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100777321   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 vvi-u.5   100259391   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 ppo-u.5   7495762   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 mtr-u.5   11443262   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 sly-u.5   101252311   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 

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Top 50 coexpressed genes to 102609583 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102609583 (cit-r.1 coexpression data)

CoexMap"102609583"


citLOC102609583 | Entrez gene ID : 102609583    
Species cit ath gma vvi ppo mtr sly bdi hvu bra bna sbi ghi osa sot nta cre tae zma
Paralog 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006483317.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3,  cyto_mito 1  (predict for XP_006483317.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_006483317.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102609583
ath-u.5
for
LOJ
ath-u.5
for
AT3G54980
gma-u.5
for
100777321
vvi-u.5
for
100259391
ppo-u.5
for
7495762
mtr-u.5
for
11443262
sly-u.5
for
101252311


Ortholog ID: 12645
Species cit ath ath bra ghi bna bna gma vvi ppo mtr sly sot nta nta
Symbol LOC102609583 LOJ AT3G54980 LOC103841410 LOC107914253 LOC106412116 LOC106439871 LOC100777321 LOC100259391 LOC7495762 LOC11443262 LOC101252311 LOC102596962 LOC107829376 LOC107777250
Function* pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like LATERAL ORGAN JUNCTION Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like uncharacterized LOC107829376 uncharacterized LOC107777250
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102609583 818508 824663 103841410 107914253 106412116 106439871 100777321 100259391 7495762 11443262 101252311 102596962 107829376 107777250
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