ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-m.8	4339653	common plant regulatory factor 1
osa-u.5	4339653	common plant regulatory factor 1
osa-r.6	4339653	common plant regulatory factor 1
osa-e.1	4339653	common plant regulatory factor 1
osa-u.5	4327165	common plant regulatory factor 1
tae-r.2	123183194	common plant regulatory factor 1
tae-r.2	123147277	G-box-binding factor 3
tae-r.2	123069043	common plant regulatory factor 1
hvu-r.1	123451045	common plant regulatory factor 1-like
bdi-r.1	100841034	G-box-binding factor 3
bdi-r.1	100835529	common plant regulatory factor 1
zma-u.5	542309	G-box binding factor 1
zma-u.5	542188	bZIP transcription factor 1
sbi-r.1	110433340	G-box-binding factor 3-like
sbi-r.1	8064695	common plant regulatory factor 1
ath-u.5	GBF2	G-box binding factor 2
ath-u.5	GBF3	G-box binding factor 3
gma-u.5	BZIP64	bZIP transcription factor bZIP64
gma-u.5	100781875	common plant regulatory factor 1
gma-u.5	BZIP77	bZIP transcription factor bZIP77
sly-u.5	101249493	transcriptional activator TAF-1
sly-u.5	101252588	transcriptional activator TAF-1-like
bra-r.6	103866484	G-box-binding factor 3
bra-r.6	103836873	G-box-binding factor 2
vvi-u.5	100257104	common plant regulatory factor 1
vvi-u.5	100248302	common plant regulatory factor 1
ppo-u.5	7457378	common plant regulatory factor 1
ppo-u.5	7494132	common plant regulatory factor 1
mtr-u.5	25500771	common plant regulatory factor 1
mtr-u.5	11431340	common plant regulatory factor 1
ghi-r.1	107909772	common plant regulatory factor 1
ghi-r.1	107900935	common plant regulatory factor 1
ghi-r.1	107945871	G-box-binding factor 3
bna-r.1	106450714	G-box-binding factor 3
bna-r.1	125593227	G-box-binding factor 2-like
bna-r.1	106390279	G-box-binding factor 3-like
sot-r.1	102597029	transcriptional activator TAF-1-like
sot-r.1	102579619	transcriptional activator TAF-1-like
cit-r.1	127901141	common plant regulatory factor 1-like
cit-r.1	102607505	common plant regulatory factor 1
nta-r.1	107824425	transcriptional activator TAF-1-like
nta-r.1	107819448	transcriptional activator TAF-1
nta-r.1	107804149	transcriptional activator TAF-1-like

Top 50 coexpressed genes to 4339653 (osa-m.8 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4339653 (osa-m.8 coexpression data)

CoexMap"4339653"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(1615 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(3003 genes)

IEA

GO MF

GO:0043565 [list] [network] sequence-specific DNA binding	(718 genes)	IEA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1113 genes)	IEA

Protein

XP_015640745.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_015640745.1)

Subcellular
localization
TargetP

other 9

(predict for XP_015640745.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-m.8 for 4339653	osa-u.5 for 4339653	osa-r.6 for 4339653	osa-e.1 for 4339653	osa-u.5 for 4327165	tae-r.2 for 123183194	tae-r.2 for 123147277	tae-r.2 for 123069043	hvu-r.1 for 123451045	bdi-r.1 for 100841034	bdi-r.1 for 100835529	zma-u.5 for 542309	zma-u.5 for 542188	sbi-r.1 for 110433340	sbi-r.1 for 8064695	ath-u.5 for GBF2	ath-u.5 for GBF3	gma-u.5 for BZIP64	gma-u.5 for 100781875	gma-u.5 for BZIP77	sly-u.5 for 101249493	sly-u.5 for 101252588	bra-r.6 for 103866484	bra-r.6 for 103836873	vvi-u.5 for 100257104	vvi-u.5 for 100248302	ppo-u.5 for 7457378	ppo-u.5 for 7494132	mtr-u.5 for 25500771	mtr-u.5 for 11431340	ghi-r.1 for 107909772	ghi-r.1 for 107900935	ghi-r.1 for 107945871	bna-r.1 for 106450714	bna-r.1 for 125593227	bna-r.1 for 106390279	sot-r.1 for 102597029	sot-r.1 for 102579619	cit-r.1 for 127901141	cit-r.1 for 102607505	nta-r.1 for 107824425	nta-r.1 for 107819448	nta-r.1 for 107804149

Ortholog

Ortholog ID: 3675

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

GBF2

GBF3

BZIP64

BZIP77

Function^*