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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   542309   G-box binding factor 1 
 zma-r.6   542309   G-box binding factor 1 
 zma-m.5   542309   G-box binding factor 1 
 zma-u.5   542188   bZIP transcription factor 1 
 osa-u.5   4327165   common plant regulatory factor 1 
 osa-u.5   4339653   common plant regulatory factor 1 
 ath-u.5   GBF3   G-box binding factor 3 
 ath-u.5   GBF2   G-box binding factor 2 
 gma-u.5   100781875   common plant regulatory factor 1 
 gma-u.5   GBF2   G-box binding factor 
 gma-u.5   BZIP77   bZIP transcription factor bZIP77 
 sly-u.5   101249493   transcriptional activator TAF-1 
 sly-u.5   101252588   transcriptional activator TAF-1-like 
 vvi-u.5   100257104   common plant regulatory factor 1 
 vvi-u.5   100248302   common plant regulatory factor 1 
 ppo-u.5   7457378   common plant regulatory factor 1 
 ppo-u.5   7494132   common plant regulatory factor 1 
 mtr-u.5   25500771   common plant regulatory factor 1 
 mtr-u.5   11431340   common plant regulatory factor 1 

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Top 50 coexpressed genes to 542309 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542309 (zma-u.5 coexpression data)

CoexMap"542309"


zmaLOC542309 | Entrez gene ID : 542309      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 2 3 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1994 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (823 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1355 genes)  IEA  
Protein NP_001130428.1 [sequence] [blastp]
XP_008648295.1 [sequence] [blastp]
XP_008648296.1 [sequence] [blastp]
XP_023156092.1 [sequence] [blastp]
XP_035815735.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001130428.1)
nucl 10  (predict for XP_008648295.1)
nucl 10  (predict for XP_008648296.1)
nucl 10  (predict for XP_023156092.1)
nucl 10  (predict for XP_035815735.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001130428.1)
other 9  (predict for XP_008648295.1)
other 9  (predict for XP_008648296.1)
other 9  (predict for XP_023156092.1)
other 9  (predict for XP_035815735.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
542309

.
zma-r.6
for
542309

.
zma-m.5
for
542309

.
zma-u.5
for
542188

.
osa-u.5
for
4327165

.
osa-u.5
for
4339653

.
ath-u.5
for
GBF3

.
ath-u.5
for
GBF2

.
gma-u.5
for
100781875

.
gma-u.5
for
GBF2

.
gma-u.5
for
BZIP77

.
sly-u.5
for
101249493

.
sly-u.5
for
101252588

.
vvi-u.5
for
100257104

.
vvi-u.5
for
100248302

.
ppo-u.5
for
7457378

.
ppo-u.5
for
7494132

.
mtr-u.5
for
25500771

.
mtr-u.5
for
11431340

.


Ortholog ID: 3675
Species ath ath gma gma sly sly osa osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol GBF3 GBF2 LOC100781875 BZIP77 LOC101249493 LOC101252588 LOC4339653 LOC4327165 LOC542309 LOC103866484 LOC103836873 LOC100257104 LOC100248302 LOC7457378 LOC7494132 LOC25500771 LOC11431340 LOC123147277 LOC123183194 LOC123451045 LOC107900935 LOC107924495 LOC106390279 LOC106450714 LOC110433340 LOC8064695 LOC102579619 LOC102597029 LOC102607505 LOC127901141 LOC100841034 LOC100835529 LOC107824425 LOC107806524
Function* G-box binding factor 3 G-box binding factor 2 common plant regulatory factor 1 bZIP transcription factor bZIP77 transcriptional activator TAF-1 transcriptional activator TAF-1-like common plant regulatory factor 1 common plant regulatory factor 1 G-box binding factor 1 G-box-binding factor 3 G-box-binding factor 2 common plant regulatory factor 1 common plant regulatory factor 1 common plant regulatory factor 1 common plant regulatory factor 1 common plant regulatory factor 1 common plant regulatory factor 1 G-box-binding factor 3 common plant regulatory factor 1 common plant regulatory factor 1-like common plant regulatory factor 1 G-box-binding factor 3 G-box-binding factor 3-like G-box-binding factor 3 G-box-binding factor 3-like common plant regulatory factor 1 transcriptional activator TAF-1-like transcriptional activator TAF-1-like common plant regulatory factor 1 common plant regulatory factor 1-like G-box-binding factor 3 common plant regulatory factor 1 transcriptional activator TAF-1-like transcriptional activator TAF-1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 4
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 4
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00562 Inositol phosphate metabolism 2
sly04070 Phosphatidylinositol signaling system 2
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 6
osa00640 Propanoate metabolism 3
osa00410 beta-Alanine metabolism 2
osa00785 Lipoic acid metabolism 2
osa01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 8
osa04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 3
zma01200 Carbon metabolism 3
zma00640 Propanoate metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
bra04075 Plant hormone signal transduction 3
bra00260 Glycine, serine and threonine metabolism 2
bra00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 7
vvi04016 MAPK signaling pathway - plant 4
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 6
vvi04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 9
ppo04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 7
ppo04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 5
mtr04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
tae04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
tae04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
ghi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 7
sbi04016 MAPK signaling pathway - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 5
sbi04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 3
nta00600 Sphingolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819235 826505 100781875 778133 101249493 101252588 4339653 4327165 542309 103866484 103836873 100257104 100248302 7457378 7494132 25500771 11431340 123147277 123183194 123451045 107900935 107924495 106390279 106450714 110433340 8064695 102579619 102597029 102607505 127901141 100841034 100835529 107824425 107806524
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