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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100257104   common plant regulatory factor 1 
 vvi-r.5   100257104   common plant regulatory factor 1 
 vvi-m.5   100257104   common plant regulatory factor 1 
 vvi-u.5   100248302   common plant regulatory factor 1 
 ath-u.5   GBF2   G-box binding factor 2 
 ath-u.5   GBF3   G-box binding factor 3 
 gma-u.5   BZIP64   bZIP transcription factor bZIP64 
 gma-u.5   100781875   common plant regulatory factor 1 
 gma-u.5   BZIP77   bZIP transcription factor bZIP77 
 bra-r.6   103836873   G-box-binding factor 2 
 bra-r.6   103866484   G-box-binding factor 3 
 ppo-u.5   7457378   common plant regulatory factor 1 
 ppo-u.5   7494132   common plant regulatory factor 1 
 mtr-u.5   25500771   common plant regulatory factor 1 
 mtr-u.5   11431340   common plant regulatory factor 1 
 ghi-r.1   107924495   G-box-binding factor 3 
 ghi-r.1   107909772   common plant regulatory factor 1 
 ghi-r.1   107900935   common plant regulatory factor 1 
 bna-r.1   106450714   G-box-binding factor 3 
 bna-r.1   125593227   G-box-binding factor 2-like 
 cit-r.1   127901141   common plant regulatory factor 1-like 
 cit-r.1   102607505   common plant regulatory factor 1 
 sly-u.5   101249493   transcriptional activator TAF-1 
 sly-u.5   101252588   transcriptional activator TAF-1-like 
 sot-r.1   102597029   transcriptional activator TAF-1-like 
 sot-r.1   102579619   transcriptional activator TAF-1-like 
 nta-r.1   107824425   transcriptional activator TAF-1-like 
 nta-r.1   107806524   transcriptional activator TAF-1-like 
 nta-r.1   107804149   transcriptional activator TAF-1-like 
 osa-u.5   4339653   common plant regulatory factor 1 
 osa-u.5   4327165   common plant regulatory factor 1 
 zma-u.5   542188   bZIP transcription factor 1 
 zma-u.5   542309   G-box binding factor 1 
 tae-r.2   123183194   common plant regulatory factor 1 
 tae-r.2   123069043   common plant regulatory factor 1 
 tae-r.2   123147277   G-box-binding factor 3 
 hvu-r.1   123451045   common plant regulatory factor 1-like 
 sbi-r.1   110433340   G-box-binding factor 3-like 
 sbi-r.1   8064695   common plant regulatory factor 1 
 bdi-r.1   100841034   G-box-binding factor 3 
 bdi-r.1   100835529   common plant regulatory factor 1 

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Top 50 coexpressed genes to 100257104 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100257104 (vvi-u.5 coexpression data)

CoexMap"100257104"


vviLOC100257104 | Entrez gene ID : 100257104      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 2 2 2 3 2 2 2 2 3 2 2 3 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1359 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (598 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (925 genes)  IEA  
Protein XP_002274755.1 [sequence] [blastp]
XP_003631394.1 [sequence] [blastp]
XP_010658874.1 [sequence] [blastp]
XP_059598309.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002274755.1)
nucl 10  (predict for XP_003631394.1)
nucl 10  (predict for XP_010658874.1)
nucl 10  (predict for XP_059598309.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_002274755.1)
other 8,  chlo 4  (predict for XP_003631394.1)
other 8  (predict for XP_010658874.1)
other 8,  chlo 4  (predict for XP_059598309.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100257104
vvi-r.5
for
100257104
vvi-m.5
for
100257104
vvi-u.5
for
100248302
ath-u.5
for
GBF2
ath-u.5
for
GBF3
gma-u.5
for
BZIP64
gma-u.5
for
100781875
gma-u.5
for
BZIP77
bra-r.6
for
103836873
bra-r.6
for
103866484
ppo-u.5
for
7457378
ppo-u.5
for
7494132
mtr-u.5
for
25500771
mtr-u.5
for
11431340
ghi-r.1
for
107924495
ghi-r.1
for
107909772
ghi-r.1
for
107900935
bna-r.1
for
106450714
bna-r.1
for
125593227
cit-r.1
for
127901141
cit-r.1
for
102607505
sly-u.5
for
101249493
sly-u.5
for
101252588
sot-r.1
for
102597029
sot-r.1
for
102579619
nta-r.1
for
107824425
nta-r.1
for
107806524
nta-r.1
for
107804149
osa-u.5
for
4339653
osa-u.5
for
4327165
zma-u.5
for
542188
zma-u.5
for
542309
tae-r.2
for
123183194
tae-r.2
for
123069043
tae-r.2
for
123147277
hvu-r.1
for
123451045
sbi-r.1
for
110433340
sbi-r.1
for
8064695
bdi-r.1
for
100841034
bdi-r.1
for
100835529


Ortholog ID: 3675
Species vvi vvi ath ath gma gma gma bra bra ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu sbi sbi bdi bdi
Symbol LOC100257104 LOC100248302 GBF2 GBF3 BZIP64 LOC100781875 BZIP77 LOC103836873 LOC103866484 LOC7457378 LOC7494132 LOC25500771 LOC11431340 LOC107924495 LOC107900935 LOC107933527 LOC106450714 LOC125593227 LOC106390279 LOC127901141 LOC102607505 LOC101249493 LOC101252588 LOC102597029 LOC102579619 LOC107824425 LOC107806524 LOC107819448 LOC4339653 LOC4327165 LOC542188 LOC542309 LOC123183194 LOC123069043 LOC123147277 LOC123451045 LOC110433340 LOC8064695 LOC100841034 LOC100835529
Function* common plant regulatory factor 1 common plant regulatory factor 1 G-box binding factor 2 G-box binding factor 3 bZIP transcription factor bZIP64 common plant regulatory factor 1 bZIP transcription factor bZIP77 G-box-binding factor 2 G-box-binding factor 3 common plant regulatory factor 1 common plant regulatory factor 1 common plant regulatory factor 1 common plant regulatory factor 1 G-box-binding factor 3 common plant regulatory factor 1 common plant regulatory factor 1 G-box-binding factor 3 G-box-binding factor 2-like G-box-binding factor 3-like common plant regulatory factor 1-like common plant regulatory factor 1 transcriptional activator TAF-1 transcriptional activator TAF-1-like transcriptional activator TAF-1-like transcriptional activator TAF-1-like transcriptional activator TAF-1-like transcriptional activator TAF-1-like transcriptional activator TAF-1 common plant regulatory factor 1 common plant regulatory factor 1 bZIP transcription factor 1 G-box binding factor 1 common plant regulatory factor 1 common plant regulatory factor 1 G-box-binding factor 3 common plant regulatory factor 1-like G-box-binding factor 3-like common plant regulatory factor 1 G-box-binding factor 3 common plant regulatory factor 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 7
vvi04016 MAPK signaling pathway - plant 4
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 6
vvi04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 4
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
bra04075 Plant hormone signal transduction 3
bra00260 Glycine, serine and threonine metabolism 2
bra00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 9
ppo04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 7
ppo04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 5
mtr04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
ghi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
ghi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 7
bna04145 Phagosome 3
bna04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 4
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00562 Inositol phosphate metabolism 2
sly04070 Phosphatidylinositol signaling system 2
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 3
nta00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00562 Inositol phosphate metabolism 2
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 6
osa00640 Propanoate metabolism 3
osa00410 beta-Alanine metabolism 2
osa00785 Lipoic acid metabolism 2
osa01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 8
osa04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 9
zma04016 MAPK signaling pathway - plant 7
zma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 3
zma01200 Carbon metabolism 3
zma00640 Propanoate metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
tae04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
tae04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
tae04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 7
sbi04016 MAPK signaling pathway - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 5
sbi04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00330 Arginine and proline metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100257104 100248302 826505 819235 100820423 100781875 778133 103836873 103866484 7457378 7494132 25500771 11431340 107924495 107900935 107933527 106450714 125593227 106390279 127901141 102607505 101249493 101252588 102597029 102579619 107824425 107806524 107819448 4339653 4327165 542188 542309 123183194 123069043 123147277 123451045 110433340 8064695 100841034 100835529
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