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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   NRPD7   RNA polymerase Rpb7-like, N-terminal domain-containing protein 
 ath-u.5   NRPD7   RNA polymerase Rpb7-like, N-terminal domain-containing protein 
 ath-r.7   NRPD7   RNA polymerase Rpb7-like, N-terminal domain-containing protein 
 ath-e.2   NRPD7   RNA polymerase Rpb7-like, N-terminal domain-containing protein 
 ath-m.4.bio   NRPD7   RNA polymerase Rpb7-like, N-terminal domain-containing protein 
 ath-m.4.hor   NRPD7   RNA polymerase Rpb7-like, N-terminal domain-containing protein 
 ath-m.4.lig   NRPD7   RNA polymerase Rpb7-like, N-terminal domain-containing protein 
 ath-m.4.str   NRPD7   RNA polymerase Rpb7-like, N-terminal domain-containing protein 
 ath-m.4.tis   NRPD7   RNA polymerase Rpb7-like, N-terminal domain-containing protein 
 ath-u.5   NRPE7   RNA polymerase Rpb7-like, N-terminal domain-containing protein 
 bra-r.6   103834253   DNA-directed RNA polymerase IV subunit 7 
 bra-r.6   103833463   DNA-directed RNA polymerase V subunit 7 
 bna-r.1   106453721   DNA-directed RNA polymerase IV subunit 7-like 
 ghi-r.1   107904797   DNA-directed RNA polymerase V subunit 7 
 ghi-r.1   107904403   DNA-directed RNA polymerase V subunit 7 
 cit-r.1   102629804   DNA-directed RNA polymerase V subunit 7 
 gma-u.5   100527862   uncharacterized LOC100527862 
 vvi-u.5   100261398   DNA-directed RNA polymerase II subunit RPB7-like 
 ppo-u.5   7473447   DNA-directed RNA polymerase V subunit 7 
 ppo-u.5   18102490   DNA-directed RNA polymerase V subunit 7 
 mtr-u.5   25485783   DNA-directed RNA polymerase V subunit 7 
 mtr-u.5   25484144   DNA-directed RNA polymerase V subunit 7 
 sly-u.5   101264710   DNA-directed RNA polymerase V subunit 7 
 sot-r.1   102584688   DNA-directed RNA polymerase V subunit 7-like 
 sot-r.1   102590183   DNA-directed RNA polymerase V subunit 7-like 
 sot-r.1   102592607   DNA-directed RNA polymerase V subunit 7-like 
 nta-r.1   107820955   DNA-directed RNA polymerase V subunit 7 
 nta-r.1   107807242   DNA-directed RNA polymerase V subunit 7-like 
 osa-u.5   4337866   DNA-directed RNA polymerase V subunit 7 
 osa-u.5   107278405   DNA-directed RNA polymerase V subunit 7 
 zma-u.5   100284005   uncharacterized LOC100284005 
 tae-r.2   123039039   DNA-directed RNA polymerase V subunit 7 
 hvu-r.1   123426139   DNA-directed RNA polymerase V subunit 7-like 
 sbi-r.1   8071189   DNA-directed RNA polymerase V subunit 7 
 bdi-r.1   100842749   DNA-directed RNA polymerase V subunit 7 
 bdi-r.1   100836334   DNA-directed RNA polymerase V subunit 7 

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Top 50 coexpressed genes to NRPD7 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NRPD7 (ath-m.9 coexpression data)

CoexMap"821862"


athNRPD7 | Entrez gene ID : 821862      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 1 2 1 1 1 2 2 1 3 2 2 1 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03020 [list] [network] RNA polymerase (52 genes)
GO BP
GO:0006352 [list] [network] DNA-templated transcription initiation  (35 genes)  IEA  
GO CC
GO:0000418 [list] [network] RNA polymerase IV complex  (16 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001326806.1 [sequence] [blastp]
NP_566719.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  chlo 1,  nucl 1,  E.R. 1  (predict for NP_001326806.1)
cyto 8,  chlo 1,  nucl 1,  E.R. 1  (predict for NP_566719.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001326806.1)
other 8  (predict for NP_566719.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
NRPD7
ath-u.5
for
NRPD7
ath-r.7
for
NRPD7
ath-e.2
for
NRPD7
ath-m.4.bio
for
NRPD7
ath-m.4.hor
for
NRPD7
ath-m.4.lig
for
NRPD7
ath-m.4.str
for
NRPD7
ath-m.4.tis
for
NRPD7
ath-u.5
for
NRPE7
bra-r.6
for
103834253
bra-r.6
for
103833463
bna-r.1
for
106453721
ghi-r.1
for
107904797
ghi-r.1
for
107904403
cit-r.1
for
102629804
gma-u.5
for
100527862
vvi-u.5
for
100261398
ppo-u.5
for
7473447
ppo-u.5
for
18102490
mtr-u.5
for
25485783
mtr-u.5
for
25484144
sly-u.5
for
101264710
sot-r.1
for
102584688
sot-r.1
for
102590183
sot-r.1
for
102592607
nta-r.1
for
107820955
nta-r.1
for
107807242
osa-u.5
for
4337866
osa-u.5
for
107278405
zma-u.5
for
100284005
tae-r.2
for
123039039
hvu-r.1
for
123426139
sbi-r.1
for
8071189
bdi-r.1
for
100842749
bdi-r.1
for
100836334


Ortholog ID: 4917
Species ath ath bra bra bna bna ghi ghi cit gma vvi ppo ppo mtr mtr sly sot sot sot nta nta osa osa zma tae tae hvu sbi bdi bdi
Symbol NRPD7 NRPE7 LOC103834253 LOC103833463 LOC106453721 LOC125576611 LOC107904797 LOC107904403 LOC102629804 LOC100527862 LOC100261398 LOC7473447 LOC18102490 LOC25485783 LOC25484144 LOC101264710 LOC102584688 LOC102592607 LOC102602091 LOC107820955 LOC107807242 LOC4337866 LOC107278405 LOC100284005 LOC123113234 LOC123180588 LOC123426139 LOC8071189 LOC100842749 LOC100836334
Function* RNA polymerase Rpb7-like, N-terminal domain-containing protein RNA polymerase Rpb7-like, N-terminal domain-containing protein DNA-directed RNA polymerase IV subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase IV subunit 7-like DNA-directed RNA polymerase IV subunit 7-like DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 uncharacterized LOC100527862 DNA-directed RNA polymerase II subunit RPB7-like DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7-like DNA-directed RNA polymerase V subunit 7-like DNA-directed RNA polymerase V subunit 7-like DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7-like DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 uncharacterized LOC100284005 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7-like DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
bna04145 Phagosome 2
bna04148 Efferocytosis 2
bna00480 Glutathione metabolism 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna04130 SNARE interactions in vesicular transport 2
bna03010 Ribosome 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03020 RNA polymerase 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03020 RNA polymerase 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 3
gma03420 Nucleotide excision repair 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
mtr00261 Monobactam biosynthesis 2
mtr00300 Lysine biosynthesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 4
osa03420 Nucleotide excision repair 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma04141 Protein processing in endoplasmic reticulum 2
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae03013 Nucleocytoplasmic transport 2
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00071 Fatty acid degradation 3
tae00350 Tyrosine metabolism 3
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03040 Spliceosome 2
sbi03420 Nucleotide excision repair 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 4
bdi03420 Nucleotide excision repair 3
bdi03040 Spliceosome 2
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821862 827116 103834253 103833463 106453721 125576611 107904797 107904403 102629804 100527862 100261398 7473447 18102490 25485783 25484144 101264710 102584688 102592607 102602091 107820955 107807242 4337866 107278405 100284005 123113234 123180588 123426139 8071189 100842749 100836334
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