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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25484144   DNA-directed RNA polymerase V subunit 7 
 mtr-r.5   25484144   DNA-directed RNA polymerase V subunit 7 
 mtr-u.5   25485783   DNA-directed RNA polymerase V subunit 7 
 gma-u.5   100527862   uncharacterized LOC100527862 
 ppo-u.5   7473447   DNA-directed RNA polymerase V subunit 7 
 ppo-u.5   18102490   DNA-directed RNA polymerase V subunit 7 
 ath-u.5   NRPD7   RNA polymerase Rpb7-like, N-terminal domain-containing protein 
 ath-u.5   NRPE7   RNA polymerase Rpb7-like, N-terminal domain-containing protein 
 vvi-u.5   100261398   DNA-directed RNA polymerase II subunit RPB7-like 
 sly-u.5   101264710   DNA-directed RNA polymerase V subunit 7 
 osa-u.5   4337866   DNA-directed RNA polymerase V subunit 7 
 osa-u.5   107278405   DNA-directed RNA polymerase V subunit 7 
 zma-u.5   100284005   uncharacterized LOC100284005 

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Top 50 coexpressed genes to 25484144 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25484144 (mtr-u.5 coexpression data)

CoexMap"25484144"


mtrLOC25484144 | Entrez gene ID : 25484144      
Species mtr gma ppo ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 1 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr03020 [list] [network] RNA polymerase (74 genes)
GO BP
GO:0006352 [list] [network] DNA-templated transcription initiation  (78 genes)  IEA  
GO CC
GO MF
GO:0003727 [list] [network] single-stranded RNA binding  (16 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (64 genes)  IEA  
Protein XP_013468363.1 [sequence] [blastp]
XP_039683769.1 [sequence] [blastp]
XP_039683770.1 [sequence] [blastp]
XP_039683772.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  E.R. 1  (predict for XP_013468363.1)
cyto 4,  nucl 4,  E.R. 1  (predict for XP_039683769.1)
cyto 5,  E.R. 2,  nucl 1,  E.R._plas 1  (predict for XP_039683770.1)
cyto 5,  E.R. 2,  nucl 1,  E.R._plas 1  (predict for XP_039683772.1)
Subcellular
localization
TargetP
other 7,  scret 6  (predict for XP_013468363.1)
other 7,  scret 6  (predict for XP_039683769.1)
scret 6,  other 5  (predict for XP_039683770.1)
scret 6,  other 5  (predict for XP_039683772.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25484144

.
mtr-r.5
for
25484144

.
mtr-u.5
for
25485783

.
gma-u.5
for
100527862

.
ppo-u.5
for
7473447

.
ppo-u.5
for
18102490

.
ath-u.5
for
NRPD7

.
ath-u.5
for
NRPE7

.
vvi-u.5
for
100261398

.
sly-u.5
for
101264710

.
osa-u.5
for
4337866

.
osa-u.5
for
107278405

.
zma-u.5
for
100284005

.


Ortholog ID: 4917
Species ath ath gma sly osa osa zma bra bra vvi ppo ppo mtr mtr tae hvu ghi ghi bna sbi sot sot cit bdi bdi nta nta
Symbol NRPD7 NRPE7 LOC100527862 LOC101264710 LOC107278405 LOC4337866 LOC100284005 LOC103833463 LOC103834253 LOC100261398 LOC7473447 LOC18102490 LOC25484144 LOC25485783 LOC123113234 LOC123426139 LOC107904797 LOC107904403 LOC125576611 LOC8071189 LOC102592607 LOC102602091 LOC102629804 LOC100836334 LOC100842749 LOC107807242 LOC107820955
Function* RNA polymerase Rpb7-like, N-terminal domain-containing protein RNA polymerase Rpb7-like, N-terminal domain-containing protein uncharacterized LOC100527862 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 uncharacterized LOC100284005 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase IV subunit 7 DNA-directed RNA polymerase II subunit RPB7-like DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7-like DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase IV subunit 7-like DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7-like DNA-directed RNA polymerase V subunit 7-like DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7-like DNA-directed RNA polymerase V subunit 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 3
gma03420 Nucleotide excision repair 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 4
osa03420 Nucleotide excision repair 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma04141 Protein processing in endoplasmic reticulum 2
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
mtr00261 Monobactam biosynthesis 2
mtr00300 Lysine biosynthesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae03013 Nucleocytoplasmic transport 2
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03020 RNA polymerase 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03020 RNA polymerase 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna04130 SNARE interactions in vesicular transport 2
bna03010 Ribosome 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03040 Spliceosome 2
sbi03420 Nucleotide excision repair 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 4
bdi03420 Nucleotide excision repair 3
bdi03040 Spliceosome 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821862 827116 100527862 101264710 107278405 4337866 100284005 103833463 103834253 100261398 7473447 18102490 25484144 25485783 123113234 123426139 107904797 107904403 125576611 8071189 102592607 102602091 102629804 100836334 100842749 107807242 107820955
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