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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18102490   DNA-directed RNA polymerase V subunit 7 
 ppo-r.4   18102490   DNA-directed RNA polymerase V subunit 7 
 ppo-u.5   7473447   DNA-directed RNA polymerase V subunit 7 
 gma-u.5   100527862   uncharacterized LOC100527862 
 mtr-u.5   25484144   DNA-directed RNA polymerase V subunit 7 
 mtr-u.5   25485783   DNA-directed RNA polymerase V subunit 7 
 ath-u.5   NRPD7   RNA polymerase Rpb7-like, N-terminal domain-containing protein 
 ath-u.5   NRPE7   RNA polymerase Rpb7-like, N-terminal domain-containing protein 
 vvi-u.5   100261398   DNA-directed RNA polymerase II subunit RPB7-like 
 sly-u.5   101264710   DNA-directed RNA polymerase V subunit 7 
 osa-u.5   4337866   DNA-directed RNA polymerase V subunit 7 
 osa-u.5   107278405   DNA-directed RNA polymerase V subunit 7 
 zma-u.5   100284005   uncharacterized LOC100284005 

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Top 50 coexpressed genes to 18102490 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18102490 (ppo-u.5 coexpression data)

CoexMap"18102490"


ppoLOC18102490 | Entrez gene ID : 18102490    
Species ppo gma mtr ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03020 [list] [network] RNA polymerase (53 genes)
GO BP
GO:0006352 [list] [network] DNA-templated transcription initiation  (71 genes)  IEA  
GO CC
GO MF
GO:0003727 [list] [network] single-stranded RNA binding  (18 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (62 genes)  IEA  
Protein XP_024465481.1 [sequence] [blastp]
XP_024465482.1 [sequence] [blastp]
XP_024465483.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  extr 2,  cyto_nucl 2,  chlo 1,  nucl 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_024465481.1)
cyto 3,  extr 2,  cyto_nucl 2,  chlo 1,  nucl 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_024465482.1)
cyto 3,  extr 2,  cyto_nucl 2,  chlo 1,  nucl 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_024465483.1)
Subcellular
localization
TargetP
scret 6  (predict for XP_024465481.1)
scret 6  (predict for XP_024465482.1)
scret 6  (predict for XP_024465483.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18102490
ppo-r.4
for
18102490
ppo-u.5
for
7473447
gma-u.5
for
100527862
mtr-u.5
for
25484144
mtr-u.5
for
25485783
ath-u.5
for
NRPD7
ath-u.5
for
NRPE7
vvi-u.5
for
100261398
sly-u.5
for
101264710
osa-u.5
for
4337866
osa-u.5
for
107278405
zma-u.5
for
100284005


Ortholog ID: 4917
Species ppo ppo gma mtr mtr ath ath bra bra vvi ghi ghi bna cit sly sot sot nta nta osa osa zma tae hvu sbi bdi bdi
Symbol LOC7473447 LOC18102490 LOC100527862 LOC25484144 LOC25485783 NRPD7 NRPE7 LOC103833463 LOC103834253 LOC100261398 LOC107904797 LOC107904403 LOC125576611 LOC102629804 LOC101264710 LOC102592607 LOC102602091 LOC107807242 LOC107820955 LOC107278405 LOC4337866 LOC100284005 LOC123113234 LOC123426139 LOC8071189 LOC100836334 LOC100842749
Function* DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 uncharacterized LOC100527862 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 RNA polymerase Rpb7-like, N-terminal domain-containing protein RNA polymerase Rpb7-like, N-terminal domain-containing protein DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase IV subunit 7 DNA-directed RNA polymerase II subunit RPB7-like DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase IV subunit 7-like DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7-like DNA-directed RNA polymerase V subunit 7-like DNA-directed RNA polymerase V subunit 7-like DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 uncharacterized LOC100284005 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7-like DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7 DNA-directed RNA polymerase V subunit 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 3
gma03420 Nucleotide excision repair 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
mtr00261 Monobactam biosynthesis 2
mtr00300 Lysine biosynthesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03020 RNA polymerase 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03020 RNA polymerase 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna04130 SNARE interactions in vesicular transport 2
bna03010 Ribosome 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 4
osa03420 Nucleotide excision repair 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma04141 Protein processing in endoplasmic reticulum 2
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae03013 Nucleocytoplasmic transport 2
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03040 Spliceosome 2
sbi03420 Nucleotide excision repair 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 4
bdi03420 Nucleotide excision repair 3
bdi03040 Spliceosome 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7473447 18102490 100527862 25484144 25485783 821862 827116 103833463 103834253 100261398 107904797 107904403 125576611 102629804 101264710 102592607 102602091 107807242 107820955 107278405 4337866 100284005 123113234 123426139 8071189 100836334 100842749
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