Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT4G31985   Ribosomal protein L39 family protein 
 ath-u.5   AT4G31985   Ribosomal protein L39 family protein 
 ath-r.7   AT4G31985   Ribosomal protein L39 family protein 
 ath-e.2   AT4G31985   Ribosomal protein L39 family protein 
 ath-m.4.bio   AT4G31985   Ribosomal protein L39 family protein 
 ath-m.4.hor   AT4G31985   Ribosomal protein L39 family protein 
 ath-m.4.lig   AT4G31985   Ribosomal protein L39 family protein 
 ath-m.4.str   AT4G31985   Ribosomal protein L39 family protein 
 ath-m.4.tis   AT4G31985   Ribosomal protein L39 family protein 
 ath-u.5   AT2G25210   Ribosomal protein L39 family protein 
 ath-u.5   AT3G02190   Ribosomal protein L39 family protein 
 bra-r.6   103862101   60S ribosomal protein L39-1 
 bra-r.6   103864616   60S ribosomal protein L39-1 
 bra-r.6   103834576   60S ribosomal protein L39-1 
 bna-r.1   106386225   60S ribosomal protein L39-1 
 bna-r.1   125580576   60S ribosomal protein L39-1 
 ghi-r.1   107937953   60S ribosomal protein L39-3 
 ghi-r.1   121204814   60S ribosomal protein L39 
 ghi-r.1   107948712   60S ribosomal protein L39 
 cit-r.1   102617787   60S ribosomal protein L39-3 
 cit-r.1   102623420   60S ribosomal protein L39-3 
 cit-r.1   127901240   60S ribosomal protein L39-3 
 gma-u.5   100306305   60S ribosomal protein L39 
 gma-u.5   100807176   60S ribosomal protein L39 
 gma-u.5   100801450   60S ribosomal protein L39 
 ppo-u.5   7493414   60S ribosomal protein L39 
 ppo-u.5   18107794   60S ribosomal protein L39 
 mtr-u.5   11435427   60S ribosomal protein L39-3 
 mtr-u.5   25481949   60S ribosomal protein L39-3 
 sly-u.5   101247403   large ribosomal subunit protein eL39x 
 sly-u.5   101256892   large ribosomal subunit protein eL39x 
 sot-r.1   102578685   60S ribosomal protein L39-3 
 sot-r.1   102586829   60S ribosomal protein L39-3-like 
 sot-r.1   102600770   60S ribosomal protein L39-3-like 
 osa-u.5   4331011   60S ribosomal protein L39 
 osa-u.5   4331014   60S ribosomal protein L39 
 osa-u.5   9268459   60S ribosomal protein L39-3-like 
 zma-u.5   118473275   60S ribosomal protein L39-like 
 zma-u.5   103654171   60S ribosomal protein L39-like 
 zma-u.5   100280595   60S ribosomal protein L39-like 
 tae-r.2   123167131   60S ribosomal protein L39 
 tae-r.2   123145928   60S ribosomal protein L39 
 tae-r.2   606340   60S ribosomal protein L39 
 sbi-r.1   8084645   60S ribosomal protein L39 
 sbi-r.1   8065406   60S ribosomal protein L39 
 bdi-r.1   100827493   60S ribosomal protein L39 
 bdi-r.1   100829077   60S ribosomal protein L39 
 bdi-r.1   100840840   60S ribosomal protein L39 

close


Top 50 coexpressed genes to AT4G31985 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT4G31985 (ath-m.9 coexpression data)

CoexMap"829329"


athAT4G31985 | Entrez gene ID : 829329    
Species ath bra bna ghi cit gma ppo mtr sly sot osa zma tae sbi bdi hvu vvi cre nta
Paralog 11 3 2 3 3 3 2 2 2 3 3 3 3 2 3 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (124 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_567886.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  plas 1,  extr 1  (predict for NP_567886.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for NP_567886.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT4G31985
ath-u.5
for
AT4G31985
ath-r.7
for
AT4G31985
ath-e.2
for
AT4G31985
ath-m.4.bio
for
AT4G31985
ath-m.4.hor
for
AT4G31985
ath-m.4.lig
for
AT4G31985
ath-m.4.str
for
AT4G31985
ath-m.4.tis
for
AT4G31985
ath-u.5
for
AT2G25210
ath-u.5
for
AT3G02190
bra-r.6
for
103862101
bra-r.6
for
103864616
bra-r.6
for
103834576
bna-r.1
for
106386225
bna-r.1
for
125580576
ghi-r.1
for
107937953
ghi-r.1
for
121204814
ghi-r.1
for
107948712
cit-r.1
for
102617787
cit-r.1
for
102623420
cit-r.1
for
127901240
gma-u.5
for
100306305
gma-u.5
for
100807176
gma-u.5
for
100801450
ppo-u.5
for
7493414
ppo-u.5
for
18107794
mtr-u.5
for
11435427
mtr-u.5
for
25481949
sly-u.5
for
101247403
sly-u.5
for
101256892
sot-r.1
for
102578685
sot-r.1
for
102586829
sot-r.1
for
102600770
osa-u.5
for
4331011
osa-u.5
for
4331014
osa-u.5
for
9268459
zma-u.5
for
118473275
zma-u.5
for
103654171
zma-u.5
for
100280595
tae-r.2
for
123167131
tae-r.2
for
123145928
tae-r.2
for
606340
sbi-r.1
for
8084645
sbi-r.1
for
8065406
bdi-r.1
for
100827493
bdi-r.1
for
100829077
bdi-r.1
for
100840840


Ortholog ID: 1911
Species ath ath ath bra bra bna bna bna ghi ghi ghi cit cit cit gma gma gma ppo ppo ppo mtr mtr sly sly sot sot sot osa osa osa zma zma zma tae tae tae sbi sbi bdi bdi bdi
Symbol AT4G31985 AT2G25210 AT3G02190 LOC103862101 LOC103864616 LOC125580576 LOC106449937 LOC106449944 LOC121204814 LOC107900491 LOC107890469 LOC102617787 LOC102623420 LOC127901240 LOC100807176 LOC100779071 LOC100818289 LOC7493414 LOC18107794 LOC18100582 LOC11435427 LOC25481949 LOC101247403 LOC101256892 LOC102578685 LOC102586829 LOC102600770 LOC4331011 LOC4331014 LOC9268459 LOC118473275 LOC103654171 LOC100280595 LOC606340 LOC123150917 LOC123139148 LOC8084645 LOC8065406 LOC100827493 LOC100829077 LOC100840840
Function* Ribosomal protein L39 family protein Ribosomal protein L39 family protein Ribosomal protein L39 family protein 60S ribosomal protein L39-1 60S ribosomal protein L39-1 60S ribosomal protein L39-1 60S ribosomal protein L39-1 60S ribosomal protein L39-1 60S ribosomal protein L39 60S ribosomal protein L39-3 60S ribosomal protein L39-3 60S ribosomal protein L39-3 60S ribosomal protein L39-3 60S ribosomal protein L39-3 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39-3 60S ribosomal protein L39-3 large ribosomal subunit protein eL39x large ribosomal subunit protein eL39x 60S ribosomal protein L39-3 60S ribosomal protein L39-3-like 60S ribosomal protein L39-3-like 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39-3-like 60S ribosomal protein L39-like 60S ribosomal protein L39-like 60S ribosomal protein L39-like 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03020 RNA polymerase 3
ath03420 Nucleotide excision repair 3
ath03018 RNA degradation 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna00220 Arginine biosynthesis 4
bna00250 Alanine, aspartate and glutamate metabolism 4
bna00270 Cysteine and methionine metabolism 4
bna00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 15
bna00220 Arginine biosynthesis 2
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00270 Cysteine and methionine metabolism 2
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
gma03050 Proteasome 2
gma03440 Homologous recombination 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829329 817059 820350 103862101 103864616 125580576 106449937 106449944 121204814 107900491 107890469 102617787 102623420 127901240 100807176 100779071 100818289 7493414 18107794 18100582 11435427 25481949 101247403 101256892 102578685 102586829 102600770 4331011 4331014 9268459 118473275 103654171 100280595 606340 123150917 123139148 8084645 8065406 100827493 100829077 100840840
The preparation time of this page was 0.1 [sec].