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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103654171   60S ribosomal protein L39-like 
 zma-r.6   103654171   60S ribosomal protein L39-like 
 zma-u.5   542444   ribosomal protein L39 
 zma-u.5   118473275   60S ribosomal protein L39-like 
 zma-u.5   100280595   60S ribosomal protein L39-like 
 sbi-r.1   8084645   60S ribosomal protein L39 
 sbi-r.1   8065406   60S ribosomal protein L39 
 osa-u.5   9268459   60S ribosomal protein L39-3-like 
 osa-u.5   4331011   60S ribosomal protein L39 
 osa-u.5   4331014   60S ribosomal protein L39 
 tae-r.2   123145928   60S ribosomal protein L39 
 tae-r.2   123139148   60S ribosomal protein L39 
 tae-r.2   606340   60S ribosomal protein L39 
 bdi-r.1   100827493   60S ribosomal protein L39 
 bdi-r.1   100840840   60S ribosomal protein L39 
 bdi-r.1   100829077   60S ribosomal protein L39 
 ath-u.5   AT2G25210   Ribosomal protein L39 family protein 
 ath-u.5   AT3G02190   Ribosomal protein L39 family protein 
 ath-u.5   AT4G31985   Ribosomal protein L39 family protein 
 gma-u.5   100818289   60S ribosomal protein L39 
 gma-u.5   100306305   60S ribosomal protein L39 
 gma-u.5   100779071   60S ribosomal protein L39 
 sly-u.5   101247403   large ribosomal subunit protein eL39x 
 sly-u.5   101256892   large ribosomal subunit protein eL39x 
 bra-r.6   103864616   60S ribosomal protein L39-1 
 bra-r.6   103870929   60S ribosomal protein L39-2 
 bra-r.6   103834576   60S ribosomal protein L39-1 
 ppo-u.5   18107794   60S ribosomal protein L39 
 ppo-u.5   18100582   60S ribosomal protein L39 
 mtr-u.5   25481949   60S ribosomal protein L39-3 
 mtr-u.5   11435427   60S ribosomal protein L39-3 
 ghi-r.1   107906927   60S ribosomal protein L39-3 
 ghi-r.1   107893420   60S ribosomal protein L39-3 
 ghi-r.1   107937953   60S ribosomal protein L39-3 
 bna-r.1   125597273   60S ribosomal protein L39-2 
 bna-r.1   125580576   60S ribosomal protein L39-1 
 bna-r.1   125609549   60S ribosomal protein L39-2 
 sot-r.1   102586829   60S ribosomal protein L39-3-like 
 sot-r.1   102600770   60S ribosomal protein L39-3-like 
 sot-r.1   102578685   60S ribosomal protein L39-3 
 cit-r.1   102617787   60S ribosomal protein L39-3 
 cit-r.1   102623420   60S ribosomal protein L39-3 
 cit-r.1   127901240   60S ribosomal protein L39-3 

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Top 50 coexpressed genes to 103654171 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103654171 (zma-u.5 coexpression data)

CoexMap"103654171"


zmaLOC103654171 | Entrez gene ID : 103654171      
Species zma sbi osa tae bdi ath gma sly bra ppo mtr ghi bna sot cit vvi cre nta hvu
Paralog 5 2 3 3 3 3 3 2 3 2 2 3 3 3 3 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03010 [list] [network] Ribosome (2925 genes)
GO BP
GO:0006412 [list] [network] translation  (661 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (112 genes)  IEA  
GO:0005840 [list] [network] ribosome  (477 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (479 genes)  IEA  
Protein NP_001364414.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  plas 1,  extr 1  (predict for NP_001364414.1)
Subcellular
localization
TargetP
mito 7  (predict for NP_001364414.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103654171
zma-r.6
for
103654171
zma-u.5
for
542444
zma-u.5
for
118473275
zma-u.5
for
100280595
sbi-r.1
for
8084645
sbi-r.1
for
8065406
osa-u.5
for
9268459
osa-u.5
for
4331011
osa-u.5
for
4331014
tae-r.2
for
123145928
tae-r.2
for
123139148
tae-r.2
for
606340
bdi-r.1
for
100827493
bdi-r.1
for
100840840
bdi-r.1
for
100829077
ath-u.5
for
AT2G25210
ath-u.5
for
AT3G02190
ath-u.5
for
AT4G31985
gma-u.5
for
100818289
gma-u.5
for
100306305
gma-u.5
for
100779071
sly-u.5
for
101247403
sly-u.5
for
101256892
bra-r.6
for
103864616
bra-r.6
for
103870929
bra-r.6
for
103834576
ppo-u.5
for
18107794
ppo-u.5
for
18100582
mtr-u.5
for
25481949
mtr-u.5
for
11435427
ghi-r.1
for
107906927
ghi-r.1
for
107893420
ghi-r.1
for
107937953
bna-r.1
for
125597273
bna-r.1
for
125580576
bna-r.1
for
125609549
sot-r.1
for
102586829
sot-r.1
for
102600770
sot-r.1
for
102578685
cit-r.1
for
102617787
cit-r.1
for
102623420
cit-r.1
for
127901240


Ortholog ID: 1911
Species zma zma zma sbi sbi osa osa osa tae tae tae bdi bdi bdi ath ath ath gma gma gma sly sly bra bra ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit cit
Symbol LOC103654171 LOC118473275 LOC100280595 LOC8084645 LOC8065406 LOC9268459 LOC4331011 LOC4331014 LOC123139148 LOC606340 LOC123150917 LOC100827493 LOC100840840 LOC100829077 AT2G25210 AT3G02190 AT4G31985 LOC100818289 LOC100779071 LOC100807176 LOC101247403 LOC101256892 LOC103864616 LOC103862101 LOC18107794 LOC18100582 LOC7493414 LOC25481949 LOC11435427 LOC107900491 LOC121204814 LOC107890469 LOC125580576 LOC106449937 LOC106449944 LOC102586829 LOC102600770 LOC102578685 LOC102617787 LOC102623420 LOC127901240
Function* 60S ribosomal protein L39-like 60S ribosomal protein L39-like 60S ribosomal protein L39-like 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39-3-like 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 Ribosomal protein L39 family protein Ribosomal protein L39 family protein Ribosomal protein L39 family protein 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 large ribosomal subunit protein eL39x large ribosomal subunit protein eL39x 60S ribosomal protein L39-1 60S ribosomal protein L39-1 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39-3 60S ribosomal protein L39-3 60S ribosomal protein L39-3 60S ribosomal protein L39 60S ribosomal protein L39-3 60S ribosomal protein L39-1 60S ribosomal protein L39-1 60S ribosomal protein L39-1 60S ribosomal protein L39-3-like 60S ribosomal protein L39-3-like 60S ribosomal protein L39-3 60S ribosomal protein L39-3 60S ribosomal protein L39-3 60S ribosomal protein L39-3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03020 RNA polymerase 3
ath03420 Nucleotide excision repair 3
ath03018 RNA degradation 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
gma03050 Proteasome 2
gma03440 Homologous recombination 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna00220 Arginine biosynthesis 4
bna00250 Alanine, aspartate and glutamate metabolism 4
bna00270 Cysteine and methionine metabolism 4
bna00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 15
bna00220 Arginine biosynthesis 2
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00270 Cysteine and methionine metabolism 2
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103654171 118473275 100280595 8084645 8065406 9268459 4331011 4331014 123139148 606340 123150917 100827493 100840840 100829077 817059 820350 829329 100818289 100779071 100807176 101247403 101256892 103864616 103862101 18107794 18100582 7493414 25481949 11435427 107900491 121204814 107890469 125580576 106449937 106449944 102586829 102600770 102578685 102617787 102623420 127901240
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