Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G04790   RING/U-box superfamily protein 
 ath-u.5   AT1G04790   RING/U-box superfamily protein 
 ath-r.7   AT1G04790   RING/U-box superfamily protein 
 ath-e.2   AT1G04790   RING/U-box superfamily protein 
 ath-m.4.bio   AT1G04790   RING/U-box superfamily protein 
 ath-m.4.hor   AT1G04790   RING/U-box superfamily protein 
 ath-m.4.lig   AT1G04790   RING/U-box superfamily protein 
 ath-m.4.str   AT1G04790   RING/U-box superfamily protein 
 ath-m.4.tis   AT1G04790   RING/U-box superfamily protein 
 bra-r.6   103844217   zinc finger CCCH domain-containing protein 13 
 bna-r.1   106370977   zinc finger CCCH domain-containing protein 13 
 bna-r.1   106401416   E3 ubiquitin-protein ligase RLIM 
 ghi-r.1   107915058   uncharacterized LOC107915058 
 ghi-r.1   107957080   uncharacterized LOC107957080 
 ghi-r.1   107942319   uncharacterized LOC107942319 
 cit-r.1   102611427   uncharacterized LOC102611427 
 gma-u.5   100789823   uncharacterized LOC100789823 
 gma-u.5   100796218   E3 ubiquitin-protein ligase RLIM 
 vvi-u.5   100247656   uncharacterized LOC100247656 
 ppo-u.5   7493196   uncharacterized LOC7493196 
 mtr-u.5   25483106   E3 ubiquitin-protein ligase RNF12-A 
 sly-u.5   101256220   uncharacterized LOC101256220 
 sot-r.1   102579041   E3 ubiquitin-protein ligase RNF6 
 nta-r.1   107824910   uncharacterized LOC107824910 
 nta-r.1   107807743   uncharacterized LOC107807743 
 osa-u.5   4336379   uncharacterized LOC4336379 
 zma-u.5   103164614   Putative RING zinc finger domain superfamily protein 
 tae-r.2   123054023   uncharacterized LOC123054023 
 tae-r.2   123189911   E3 ubiquitin-protein ligase RNF12 
 tae-r.2   123046140   uncharacterized LOC123046140 
 hvu-r.1   123427226   E3 ubiquitin-protein ligase RNF12-like 
 sbi-r.1   8064467   uncharacterized LOC8064467 
 bdi-r.1   100837137   uncharacterized LOC100837137 
 cre-r.1   CHLRE_01g051700v5   uncharacterized protein 

close


Top 50 coexpressed genes to AT1G04790 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT1G04790 (ath-m.9 coexpression data)

CoexMap"839412"


athAT1G04790 | Entrez gene ID : 839412      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_563717.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_563717.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_563717.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G04790
ath-u.5
for
AT1G04790
ath-r.7
for
AT1G04790
ath-e.2
for
AT1G04790
ath-m.4.bio
for
AT1G04790
ath-m.4.hor
for
AT1G04790
ath-m.4.lig
for
AT1G04790
ath-m.4.str
for
AT1G04790
ath-m.4.tis
for
AT1G04790
bra-r.6
for
103844217
bna-r.1
for
106370977
bna-r.1
for
106401416
ghi-r.1
for
107915058
ghi-r.1
for
107957080
ghi-r.1
for
107942319
cit-r.1
for
102611427
gma-u.5
for
100789823
gma-u.5
for
100796218
vvi-u.5
for
100247656
ppo-u.5
for
7493196
mtr-u.5
for
25483106
sly-u.5
for
101256220
sot-r.1
for
102579041
nta-r.1
for
107824910
nta-r.1
for
107807743
osa-u.5
for
4336379
zma-u.5
for
103164614
tae-r.2
for
123054023
tae-r.2
for
123189911
tae-r.2
for
123046140
hvu-r.1
for
123427226
sbi-r.1
for
8064467
bdi-r.1
for
100837137
cre-r.1
for
CHLRE_01g051700v5


Ortholog ID: 8260
Species ath bra bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT1G04790 LOC103844217 LOC106370977 LOC106401416 LOC107915058 LOC107957080 LOC107890581 LOC102611427 LOC100789823 LOC100796218 LOC100247656 LOC7493196 LOC25483106 LOC101256220 LOC102579041 LOC107824910 LOC107807743 LOC4336379 LOC103164614 LOC123054023 LOC123189911 LOC123046140 LOC123427226 LOC8064467 LOC100837137 CHLRE_01g051700v5
Function* RING/U-box superfamily protein zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13 E3 ubiquitin-protein ligase RLIM uncharacterized LOC107915058 uncharacterized LOC107957080 uncharacterized LOC107890581 uncharacterized LOC102611427 uncharacterized LOC100789823 E3 ubiquitin-protein ligase RLIM uncharacterized LOC100247656 uncharacterized LOC7493196 E3 ubiquitin-protein ligase RNF12-A uncharacterized LOC101256220 E3 ubiquitin-protein ligase RNF6 uncharacterized LOC107824910 uncharacterized LOC107807743 uncharacterized LOC4336379 Putative RING zinc finger domain superfamily protein uncharacterized LOC123054023 E3 ubiquitin-protein ligase RNF12 uncharacterized LOC123046140 E3 ubiquitin-protein ligase RNF12-like uncharacterized LOC8064467 uncharacterized LOC100837137 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 4
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit00562 Inositol phosphate metabolism 2
cit04070 Phosphatidylinositol signaling system 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo03083 Polycomb repressive complex 2
ppo03250 Viral life cycle - HIV-1 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta03250 Viral life cycle - HIV-1 4
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839412 103844217 106370977 106401416 107915058 107957080 107890581 102611427 100789823 100796218 100247656 7493196 25483106 101256220 102579041 107824910 107807743 4336379 103164614 123054023 123189911 123046140 123427226 8064467 100837137 66052168
The preparation time of this page was 0.1 [sec].