ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-r.4	18102185	proteinaceous RNase P 2
ppo-u.5	18102185	proteinaceous RNase P 2
ppo-u.5	7496601	proteinaceous RNase P 1, chloroplastic/mitochondrial
ppo-u.5	18108898	proteinaceous RNase P 2
ppo-u.5	7494525	proteinaceous RNase P 1, chloroplastic/mitochondrial
gma-u.5	100802795	proteinaceous RNase P 2
gma-u.5	100809412	proteinaceous RNase P 1, chloroplastic/mitochondrial
gma-u.5	100804176	proteinaceous RNase P 2
mtr-u.5	11433451	proteinaceous RNase P 1, chloroplastic/mitochondrial
mtr-u.5	11406549	proteinaceous RNase P 2
mtr-u.5	112417117	proteinaceous RNase P 2
ath-u.5	PRORP2	proteinaceous RNase P 2
ath-u.5	PRORP1	proteinaceous RNase P 1
ath-u.5	PRORP3	proteinaceous RNase P 3
bra-r.6	103867624	proteinaceous RNase P 1, chloroplastic/mitochondrial
bra-r.6	103859603	proteinaceous RNase P 3
vvi-u.5	100855405	proteinaceous RNase P 2
vvi-u.5	100263566	proteinaceous RNase P 2
vvi-u.5	100243870	proteinaceous RNase P 1, chloroplastic/mitochondrial
ghi-r.1	107896262	proteinaceous RNase P 1, chloroplastic/mitochondrial
ghi-r.1	107930867	proteinaceous RNase P 1, chloroplastic/mitochondrial
ghi-r.1	107915728	proteinaceous RNase P 1, chloroplastic/mitochondrial
bna-r.1	106396431	proteinaceous RNase P 1, chloroplastic/mitochondrial
bna-r.1	106347886	proteinaceous RNase P 3-like
bna-r.1	106349098	proteinaceous RNase P 2
cit-r.1	102622852	proteinaceous RNase P 1, chloroplastic/mitochondrial-like
cit-r.1	102618651	proteinaceous RNase P 2
cit-r.1	102614952	proteinaceous RNase P 1, chloroplastic/mitochondrial
sly-u.5	101247626	proteinaceous RNase P 1, chloroplastic/mitochondrial
sly-u.5	101248213	proteinaceous RNase P 1, chloroplastic/mitochondrial
sly-u.5	101249830	proteinaceous RNase P 2-like
sot-r.1	102598402	proteinaceous RNase P 1, chloroplastic/mitochondrial
sot-r.1	102602824	proteinaceous RNase P 2-like
sot-r.1	102606104	proteinaceous RNase P 1, chloroplastic/mitochondrial-like
nta-r.1	107770656	proteinaceous RNase P 2
nta-r.1	107770111	proteinaceous RNase P 1, chloroplastic/mitochondrial
nta-r.1	107768886	proteinaceous RNase P 2-like
osa-u.5	9266673	proteinaceous RNase P 1, chloroplastic/mitochondrial
osa-u.5	4324012	proteinaceous RNase P 2
osa-u.5	4328994	proteinaceous RNase P 1, chloroplastic/mitochondrial
zma-u.5	100283973	antiporter/ drug transporter/ transporter
zma-u.5	100281164	uncharacterized LOC100281164
zma-u.5	103626926	proteinaceous RNase P 1, chloroplastic/mitochondrial
tae-r.2	123055432	proteinaceous RNase P 1, chloroplastic/mitochondrial
tae-r.2	123191255	proteinaceous RNase P 1, chloroplastic/mitochondrial
tae-r.2	123176609	proteinaceous RNase P 1, chloroplastic/mitochondrial
hvu-r.1	123428572	proteinaceous RNase P 1, chloroplastic/mitochondrial
hvu-r.1	123445646	proteinaceous RNase P 2
sbi-r.1	8083895	proteinaceous RNase P 2
sbi-r.1	8059101	uncharacterized LOC8059101
sbi-r.1	8076526	proteinaceous RNase P 1, chloroplastic/mitochondrial
bdi-r.1	100821676	proteinaceous RNase P 1, chloroplastic/mitochondrial
bdi-r.1	100835940	proteinaceous RNase P 2
bdi-r.1	100845397	proteinaceous RNase P 1, chloroplastic/mitochondrial
cre-r.1	CHLRE_13g563850v5	uncharacterized protein

Top 50 coexpressed genes to 18102185 (ppo-r.4 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 18102185 (ppo-r.4 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

proteinaceous RNase P 2

KEGG

GO BP

GO:0001682 [list] [network] tRNA 5'-leader removal

(9 genes)

IEA

GO CC

GO MF

GO:0004526 [list] [network] ribonuclease P activity	(5 genes)	IEA
GO:0005515 [list] [network] protein binding	(4916 genes)	IEA

Protein

XP_024463967.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto 1

(predict for XP_024463967.2)

Subcellular
localization
TargetP

other 6

(predict for XP_024463967.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-r.4 for 18102185	ppo-u.5 for 18102185	ppo-u.5 for 7496601	ppo-u.5 for 18108898	ppo-u.5 for 7494525	gma-u.5 for 100802795	gma-u.5 for 100809412	gma-u.5 for 100804176	mtr-u.5 for 11433451	mtr-u.5 for 11406549	mtr-u.5 for 112417117	ath-u.5 for PRORP2	ath-u.5 for PRORP1	ath-u.5 for PRORP3	bra-r.6 for 103867624	bra-r.6 for 103859603	vvi-u.5 for 100855405	vvi-u.5 for 100263566	vvi-u.5 for 100243870	ghi-r.1 for 107896262	ghi-r.1 for 107930867	ghi-r.1 for 107915728	bna-r.1 for 106396431	bna-r.1 for 106347886	bna-r.1 for 106349098	cit-r.1 for 102622852	cit-r.1 for 102618651	cit-r.1 for 102614952	sly-u.5 for 101247626	sly-u.5 for 101248213	sly-u.5 for 101249830	sot-r.1 for 102598402	sot-r.1 for 102602824	sot-r.1 for 102606104	nta-r.1 for 107770656	nta-r.1 for 107770111	nta-r.1 for 107768886	osa-u.5 for 9266673	osa-u.5 for 4324012	osa-u.5 for 4328994	zma-u.5 for 100283973	zma-u.5 for 100281164	zma-u.5 for 103626926	tae-r.2 for 123055432	tae-r.2 for 123191255	tae-r.2 for 123176609	hvu-r.1 for 123428572	hvu-r.1 for 123445646	sbi-r.1 for 8083895	sbi-r.1 for 8059101	sbi-r.1 for 8076526	bdi-r.1 for 100821676	bdi-r.1 for 100835940	bdi-r.1 for 100845397	cre-r.1 for CHLRE_13g563850v5

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Ortholog

Ortholog ID: 1651

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

PRORP2

PRORP1

Function^*