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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_13g563850v5   uncharacterized protein 
 ath-u.5   PRORP2   proteinaceous RNase P 2 
 ath-u.5   PRORP1   proteinaceous RNase P 1 
 ath-u.5   PRORP3   proteinaceous RNase P 3 
 gma-u.5   100787851   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 gma-u.5   100802795   proteinaceous RNase P 2 
 gma-u.5   100809412   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 sly-u.5   101247626   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 sly-u.5   101249830   proteinaceous RNase P 2-like 
 sly-u.5   101248213   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 osa-u.5   4328994   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 osa-u.5   9266673   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 osa-u.5   4324012   proteinaceous RNase P 2 
 zma-u.5   100283973   antiporter/ drug transporter/ transporter 
 zma-u.5   103626926   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 zma-u.5   100281164   uncharacterized LOC100281164 
 vvi-u.5   100252019   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 vvi-u.5   100263566   proteinaceous RNase P 2 
 vvi-u.5   100242208   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 ppo-u.5   7496601   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 ppo-u.5   7494525   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 ppo-u.5   7491959   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 mtr-u.5   112417117   proteinaceous RNase P 2 
 mtr-u.5   11406549   proteinaceous RNase P 2 
 mtr-u.5   11433451   proteinaceous RNase P 1, chloroplastic/mitochondrial 

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Top 50 coexpressed genes to CHLRE_13g563850v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_13g563850v5 (cre-r.1 coexpression data)

CoexMap"5718993"


creCHLRE_13g563850v5 | Entrez gene ID : 5718993      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 3 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001682 [list] [network] tRNA 5'-leader removal  (5 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (441 genes)  IEA  
GO MF
GO:0004526 [list] [network] ribonuclease P activity  (2 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042917198.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  E.R. 2,  golg 2,  nucl 1,  cyto 1,  mito 1,  extr 1,  vacu 1,  cyto_nucl 1  (predict for XP_042917198.1)
Subcellular
localization
TargetP
scret 3  (predict for XP_042917198.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_13g563850v5

.
ath-u.5
for
PRORP2

.
ath-u.5
for
PRORP1

.
ath-u.5
for
PRORP3

.
gma-u.5
for
100787851

.
gma-u.5
for
100802795

.
gma-u.5
for
100809412

.
sly-u.5
for
101247626

.
sly-u.5
for
101249830

.
sly-u.5
for
101248213

.
osa-u.5
for
4328994

.
osa-u.5
for
9266673

.
osa-u.5
for
4324012

.
zma-u.5
for
100283973

.
zma-u.5
for
103626926

.
zma-u.5
for
100281164

.
vvi-u.5
for
100252019

.
vvi-u.5
for
100263566

.
vvi-u.5
for
100242208

.
ppo-u.5
for
7496601

.
ppo-u.5
for
7494525

.
ppo-u.5
for
7491959

.
mtr-u.5
for
112417117

.
mtr-u.5
for
11406549

.
mtr-u.5
for
11433451

.


Ortholog ID: 1651
Species ath ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol PRORP2 AT5G60430 LOC100804176 LOC100787851 LOC101249830 LOC101247626 LOC4328994 LOC4324012 LOC100283973 LOC100281164 LOC103859603 LOC100242208 LOC100855405 LOC7491959 LOC7494525 LOC112417117 LOC11406549 LOC123175464 LOC123063623 LOC123445646 LOC123428572 LOC107933015 LOC107961690 LOC106396431 LOC106349098 CHLRE_13g563850v5 LOC8083895 LOC8059101 LOC102598402 LOC102606104 LOC102618651 LOC102622852 LOC100845397 LOC100835940 LOC107770656 LOC107768886
Function* proteinaceous RNase P 2 antiporter/ drug transporter proteinaceous RNase P 2 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2-like proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2 antiporter/ drug transporter/ transporter uncharacterized LOC100281164 proteinaceous RNase P 3 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2 proteinaceous RNase P 2 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2 proteinaceous RNase P 2 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2 uncharacterized protein proteinaceous RNase P 2 uncharacterized LOC8059101 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial-like proteinaceous RNase P 2 proteinaceous RNase P 1, chloroplastic/mitochondrial-like proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2 proteinaceous RNase P 2 proteinaceous RNase P 2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03440 Homologous recombination 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816166 836164 100804176 100787851 101249830 101247626 4328994 4324012 100283973 100281164 103859603 100242208 100855405 7491959 7494525 112417117 11406549 123175464 123063623 123445646 123428572 107933015 107961690 106396431 106349098 5718993 8083895 8059101 102598402 102606104 102618651 102622852 100845397 100835940 107770656 107768886
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