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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100263566   proteinaceous RNase P 2 
 vvi-r.5   100263566   proteinaceous RNase P 2 
 vvi-u.5   100855405   proteinaceous RNase P 2 
 vvi-u.5   100252019   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 vvi-u.5   100242208   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 ath-u.5   PRORP2   proteinaceous RNase P 2 
 ath-u.5   PRORP1   proteinaceous RNase P 1 
 ath-u.5   PRORP3   proteinaceous RNase P 3 
 gma-u.5   100802795   proteinaceous RNase P 2 
 gma-u.5   100809412   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 gma-u.5   100804176   proteinaceous RNase P 2 
 bra-r.6   103867624   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 bra-r.6   103859603   proteinaceous RNase P 3 
 ppo-u.5   7496601   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 ppo-u.5   7494525   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 ppo-u.5   18102185   proteinaceous RNase P 2 
 mtr-u.5   11433451   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 mtr-u.5   11406549   proteinaceous RNase P 2 
 mtr-u.5   112417117   proteinaceous RNase P 2 
 ghi-r.1   107896262   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 ghi-r.1   107930867   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 ghi-r.1   107915728   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 bna-r.1   106396431   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 bna-r.1   106347886   proteinaceous RNase P 3-like 
 bna-r.1   106349098   proteinaceous RNase P 2 
 cit-r.1   102622852   proteinaceous RNase P 1, chloroplastic/mitochondrial-like 
 cit-r.1   102618651   proteinaceous RNase P 2 
 cit-r.1   102614952   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 sly-u.5   101247626   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 sly-u.5   101248213   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 sly-u.5   101249830   proteinaceous RNase P 2-like 
 sot-r.1   102598402   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 sot-r.1   102602824   proteinaceous RNase P 2-like 
 sot-r.1   102606104   proteinaceous RNase P 1, chloroplastic/mitochondrial-like 
 nta-r.1   107770656   proteinaceous RNase P 2 
 nta-r.1   107770111   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 nta-r.1   107768886   proteinaceous RNase P 2-like 
 osa-u.5   9266673   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 osa-u.5   4324012   proteinaceous RNase P 2 
 osa-u.5   4328994   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 zma-u.5   100283973   antiporter/ drug transporter/ transporter 
 zma-u.5   100281164   uncharacterized LOC100281164 
 zma-u.5   103626926   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 tae-r.2   123055432   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 tae-r.2   123191255   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 tae-r.2   123176609   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 hvu-r.1   123428572   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 hvu-r.1   123445646   proteinaceous RNase P 2 
 sbi-r.1   8083895   proteinaceous RNase P 2 
 sbi-r.1   8059101   uncharacterized LOC8059101 
 sbi-r.1   8076526   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 bdi-r.1   100821676   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 bdi-r.1   100835940   proteinaceous RNase P 2 
 bdi-r.1   100845397   proteinaceous RNase P 1, chloroplastic/mitochondrial 
 cre-r.1   CHLRE_13g563850v5   uncharacterized protein 

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Top 50 coexpressed genes to 100263566 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100263566 (vvi-u.5 coexpression data)

CoexMap"100263566"


vviLOC100263566 | Entrez gene ID : 100263566    
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 3 2 3 3 3 3 3 3 3 3 3 3 3 2 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001682 [list] [network] tRNA 5'-leader removal  (11 genes)  IEA  
GO CC
GO MF
GO:0004526 [list] [network] ribonuclease P activity  (5 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010662456.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 3,  chlo_mito 3  (predict for XP_010662456.2)
Subcellular
localization
TargetP
scret 3  (predict for XP_010662456.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100263566
vvi-r.5
for
100263566
vvi-u.5
for
100855405
vvi-u.5
for
100252019
vvi-u.5
for
100242208
ath-u.5
for
PRORP2
ath-u.5
for
PRORP1
ath-u.5
for
PRORP3
gma-u.5
for
100802795
gma-u.5
for
100809412
gma-u.5
for
100804176
bra-r.6
for
103867624
bra-r.6
for
103859603
ppo-u.5
for
7496601
ppo-u.5
for
7494525
ppo-u.5
for
18102185
mtr-u.5
for
11433451
mtr-u.5
for
11406549
mtr-u.5
for
112417117
ghi-r.1
for
107896262
ghi-r.1
for
107930867
ghi-r.1
for
107915728
bna-r.1
for
106396431
bna-r.1
for
106347886
bna-r.1
for
106349098
cit-r.1
for
102622852
cit-r.1
for
102618651
cit-r.1
for
102614952
sly-u.5
for
101247626
sly-u.5
for
101248213
sly-u.5
for
101249830
sot-r.1
for
102598402
sot-r.1
for
102602824
sot-r.1
for
102606104
nta-r.1
for
107770656
nta-r.1
for
107770111
nta-r.1
for
107768886
osa-u.5
for
9266673
osa-u.5
for
4324012
osa-u.5
for
4328994
zma-u.5
for
100283973
zma-u.5
for
100281164
zma-u.5
for
103626926
tae-r.2
for
123055432
tae-r.2
for
123191255
tae-r.2
for
123176609
hvu-r.1
for
123428572
hvu-r.1
for
123445646
sbi-r.1
for
8083895
sbi-r.1
for
8059101
sbi-r.1
for
8076526
bdi-r.1
for
100821676
bdi-r.1
for
100835940
bdi-r.1
for
100845397
cre-r.1
for
CHLRE_13g563850v5


Ortholog ID: 1651
Species vvi vvi vvi ath ath ath gma gma gma bra bra ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit cit sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC100855405 LOC100252019 LOC100242208 PRORP2 PRORP1 AT5G60430 LOC100809412 LOC100804176 LOC100787851 LOC103867624 LOC103859603 LOC7496601 LOC7494525 LOC7491959 LOC11433451 LOC11406549 LOC112417117 LOC107953278 LOC107961690 LOC107933015 LOC106396431 LOC106349098 LOC106451299 LOC102622852 LOC102618651 LOC102614952 LOC101247626 LOC101248213 LOC101249830 LOC102598402 LOC102602824 LOC102606104 LOC107770656 LOC107768886 LOC107776617 LOC9266673 LOC4324012 LOC4328994 LOC100283973 LOC100281164 LOC103626926 LOC123055432 LOC123175464 LOC123063623 LOC123428572 LOC123445646 LOC8083895 LOC8059101 LOC8076526 LOC100821676 LOC100835940 LOC100845397 CHLRE_13g563850v5
Function* proteinaceous RNase P 2 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2 proteinaceous RNase P 1 antiporter/ drug transporter proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 3 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2 proteinaceous RNase P 2 proteinaceous RNase P 2 proteinaceous RNase P 2 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial-like proteinaceous RNase P 2 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2-like proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2-like proteinaceous RNase P 1, chloroplastic/mitochondrial-like proteinaceous RNase P 2 proteinaceous RNase P 2-like proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2 proteinaceous RNase P 1, chloroplastic/mitochondrial antiporter/ drug transporter/ transporter uncharacterized LOC100281164 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2 proteinaceous RNase P 2 uncharacterized LOC8059101 proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 1, chloroplastic/mitochondrial proteinaceous RNase P 2 proteinaceous RNase P 1, chloroplastic/mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03440 Homologous recombination 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03060 Protein export 2
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00300 Lysine biosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00770 Pantothenate and CoA biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100855405 100252019 100242208 816166 817782 836164 100809412 100804176 100787851 103867624 103859603 7496601 7494525 7491959 11433451 11406549 112417117 107953278 107961690 107933015 106396431 106349098 106451299 102622852 102618651 102614952 101247626 101248213 101249830 102598402 102602824 102606104 107770656 107768886 107776617 9266673 4324012 4328994 100283973 100281164 103626926 123055432 123175464 123063623 123428572 123445646 8083895 8059101 8076526 100821676 100835940 100845397 5718993
The preparation time of this page was 1.5 [sec].