ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	18094493	pentatricopeptide repeat-containing protein At5g13270, chloroplastic
ppo-r.4	18094493	pentatricopeptide repeat-containing protein At5g13270, chloroplastic
gma-u.5	100806216	pentatricopeptide repeat-containing protein At5g13270, chloroplastic
gma-u.5	100807173	pentatricopeptide repeat-containing protein At5g13270, chloroplastic
ath-u.5	RARE1	Pentatricopeptide repeat (PPR) superfamily protein
bra-r.6	103846587	pentatricopeptide repeat-containing protein At5g13270, chloroplastic
vvi-u.5	100260840	pentatricopeptide repeat-containing protein At5g13270, chloroplastic
ghi-r.1	107928792	pentatricopeptide repeat-containing protein At5g13270, chloroplastic
ghi-r.1	121213696	pentatricopeptide repeat-containing protein At5g13270, chloroplastic
bna-r.1	106372305	pentatricopeptide repeat-containing protein At5g13270, chloroplastic
bna-r.1	111201492	pentatricopeptide repeat-containing protein At5g13270, chloroplastic

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(384 genes)

IEA

GO CC

GO MF

GO:0008270 [list] [network] zinc ion binding	(777 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1480 genes)	IEA
GO:0005515 [list] [network] protein binding	(4916 genes)	IEA

Protein

XP_024448821.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 3, mito 1, E.R. 1, cyto_nucl 1, cysk_nucl 1

(predict for XP_024448821.1)

Subcellular
localization
TargetP

mito 3

(predict for XP_024448821.1)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18094493	ppo-r.4 for 18094493	gma-u.5 for 100806216	gma-u.5 for 100807173	ath-u.5 for RARE1	bra-r.6 for 103846587	vvi-u.5 for 100260840	ghi-r.1 for 107928792	ghi-r.1 for 121213696	bna-r.1 for 106372305	bna-r.1 for 111201492