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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18105528   transcription initiation factor TFIID subunit 2 
 ppo-r.4   18105528   transcription initiation factor TFIID subunit 2 
 gma-u.5   100803129   transcription initiation factor TFIID subunit 2 
 gma-u.5   100792795   transcription initiation factor TFIID subunit 2 
 mtr-u.5   25481544   transcription initiation factor TFIID subunit 2 
 ath-u.5   TAF2   TBP-associated factor 2 
 bra-r.6   103831869   transcription initiation factor TFIID subunit 2 
 vvi-u.5   100266355   transcription initiation factor TFIID subunit 2 
 ghi-r.1   121203593   transcription initiation factor TFIID subunit 2 
 ghi-r.1   121219274   transcription initiation factor TFIID subunit 2 
 ghi-r.1   107933166   transcription initiation factor TFIID subunit 2 
 bna-r.1   106354316   transcription initiation factor TFIID subunit 2 
 bna-r.1   111207081   transcription initiation factor TFIID subunit 2-like 
 cit-r.1   102613880   transcription initiation factor TFIID subunit 2 
 sly-u.5   101259036   transcription initiation factor TFIID subunit 2 
 sot-r.1   102578835   transcription initiation factor TFIID subunit 2 
 nta-r.1   107811791   transcription initiation factor TFIID subunit 2 
 nta-r.1   107824526   transcription initiation factor TFIID subunit 2 
 osa-u.5   4347029   transcription initiation factor TFIID subunit 2 
 zma-u.5   103649142   transcription initiation factor TFIID subunit 2 
 zma-u.5   103634102   transcription initiation factor TFIID subunit 2 
 tae-r.2   123121491   transcription initiation factor TFIID subunit 2 
 tae-r.2   123111934   transcription initiation factor TFIID subunit 2 
 tae-r.2   123103714   transcription initiation factor TFIID subunit 2 
 hvu-r.1   123396501   transcription initiation factor TFIID subunit 2 
 hvu-r.1   123428476   transcription initiation factor TFIID subunit 2-like 
 sbi-r.1   8055807   transcription initiation factor TFIID subunit 2 
 bdi-r.1   100821849   transcription initiation factor TFIID subunit 2 
 cre-r.1   CHLRE_13g583500v5   uncharacterized protein 

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Top 50 coexpressed genes to 18105528 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18105528 (ppo-u.5 coexpression data)

CoexMap"18105528"


ppoLOC18105528 | Entrez gene ID : 18105528    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 1 1 1 1 3 2 1 1 1 2 1 2 3 2 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03022 [list] [network] Basal transcription factors (55 genes)
GO BP
GO:0006367 [list] [network] transcription initiation at RNA polymerase II promoter  (36 genes)  IEA  
GO CC
GO:0005669 [list] [network] transcription factor TFIID complex  (22 genes)  IEA  
GO MF
GO:0016251 [list] [network] RNA polymerase II general transcription initiation factor activity  (18 genes)  IEA  
GO:0008237 [list] [network] metallopeptidase activity  (109 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (170 genes)  IEA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (442 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
Protein XP_024442756.1 [sequence] [blastp]
XP_024442757.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  plas 1,  cysk 1,  chlo_mito 1,  cysk_plas 1  (predict for XP_024442756.1)
nucl 3,  chlo 2,  cyto 2,  cysk 2  (predict for XP_024442757.1)
Subcellular
localization
TargetP
other 9  (predict for XP_024442756.1)
other 7,  scret 3  (predict for XP_024442757.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18105528
ppo-r.4
for
18105528
gma-u.5
for
100803129
gma-u.5
for
100792795
mtr-u.5
for
25481544
ath-u.5
for
TAF2
bra-r.6
for
103831869
vvi-u.5
for
100266355
ghi-r.1
for
121203593
ghi-r.1
for
121219274
ghi-r.1
for
107933166
bna-r.1
for
106354316
bna-r.1
for
111207081
cit-r.1
for
102613880
sly-u.5
for
101259036
sot-r.1
for
102578835
nta-r.1
for
107811791
nta-r.1
for
107824526
osa-u.5
for
4347029
zma-u.5
for
103649142
zma-u.5
for
103634102
tae-r.2
for
123121491
tae-r.2
for
123111934
tae-r.2
for
123103714
hvu-r.1
for
123396501
hvu-r.1
for
123428476
sbi-r.1
for
8055807
bdi-r.1
for
100821849
cre-r.1
for
CHLRE_13g583500v5


Ortholog ID: 7854
Species ppo gma gma mtr ath bra vvi ghi ghi ghi bna bna cit sly sot nta nta osa zma zma tae tae tae hvu hvu sbi bdi cre
Symbol LOC18105528 LOC100803129 LOC100792795 LOC25481544 TAF2 LOC103831869 LOC100266355 LOC121203593 LOC121219274 LOC107953669 LOC106354316 LOC111207081 LOC102613880 LOC101259036 LOC102578835 LOC107811791 LOC107824526 LOC4347029 LOC103649142 LOC103634102 LOC123121491 LOC123111934 LOC123103714 LOC123396501 LOC123428476 LOC8055807 LOC100821849 CHLRE_13g583500v5
Function* transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 TBP-associated factor 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2-like transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2-like transcription initiation factor TFIID subunit 2 transcription initiation factor TFIID subunit 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo03083 Polycomb repressive complex 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 4
ath03040 Spliceosome 3
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03013 Nucleocytoplasmic transport 3
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 3
bna03022 Basal transcription factors 2
bna03082 ATP-dependent chromatin remodeling 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18105528 100803129 100792795 25481544 843733 103831869 100266355 121203593 121219274 107953669 106354316 111207081 102613880 101259036 102578835 107811791 107824526 4347029 103649142 103634102 123121491 123111934 123103714 123396501 123428476 8055807 100821849 5719359
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