ATTED-II : GeneCoexpression result

Species	Gene	Description
sly-r.6	101246845	YTH domain-containing protein ECT3-like
sly-u.5	101246845	YTH domain-containing protein ECT3-like
sly-u.5	101247445	uncharacterized LOC101247445
sly-u.5	101247143	uncharacterized LOC101247143
sot-r.1	102582785	uncharacterized LOC102582785
sot-r.1	102583780	uncharacterized LOC102583780
nta-r.1	107796409	uncharacterized LOC107796409
nta-r.1	107805037	uncharacterized LOC107805037
ath-u.5	AT4G11970	YTH family protein
gma-u.5	100799369	30-kDa cleavage and polyadenylation specificity factor 30
gma-u.5	100784130	30-kDa cleavage and polyadenylation specificity factor 30
bra-r.6	103853498	YTH domain-containing protein 1
vvi-u.5	100254803	uncharacterized LOC100254803
ppo-u.5	7490930	uncharacterized LOC7490930
ghi-r.1	107930042	YTH domain-containing protein 1
ghi-r.1	107926972	YTH domain-containing protein 1
bna-r.1	106390672	YTH domain-containing protein 1
bna-r.1	106380571	YTH domain-containing protein 1
bna-r.1	125586911	YTH domain-containing protein 1-like
cit-r.1	102622363	uncharacterized LOC102622363
cre-r.1	CHLRE_12g516400v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0048024 [list] [network] regulation of mRNA splicing, via spliceosome	(27 genes)	IEA
GO:0000398 [list] [network] mRNA splicing, via spliceosome	(162 genes)	IEA

GO CC

GO:0005654 [list] [network] nucleoplasm

(193 genes)

IEA

GO MF

GO:1990247 [list] [network] N6-methyladenosine-containing RNA reader activity	(5 genes)	IEA
GO:0003729 [list] [network] mRNA binding	(315 genes)	IEA

Protein

XP_004244593.1 [sequence] [blastp]
XP_010324610.1 [sequence] [blastp]
XP_010324611.1 [sequence] [blastp]
XP_010324612.1 [sequence] [blastp]
XP_025888316.1 [sequence] [blastp]
XP_069143848.1 [sequence] [blastp]
XP_069143849.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, mito 3, chlo 2, cyto_nucl 2, cysk_nucl 2, nucl_plas 2	(predict for XP_004244593.1)
nucl 4, mito 3, chlo 2, cyto_nucl 2, cysk_nucl 2, nucl_plas 2	(predict for XP_010324610.1)
nucl 4, mito 3, chlo 2, cyto_nucl 2, cysk_nucl 2, nucl_plas 2	(predict for XP_010324611.1)
nucl 4, mito 3, chlo 2, cyto_nucl 2, cysk_nucl 2, nucl_plas 2	(predict for XP_010324612.1)
nucl 4, cyto_nucl 3, chlo 2, pero 2	(predict for XP_025888316.1)
nucl 5, mito 3, chlo 1, cyto_mito 1, mito_plas 1	(predict for XP_069143848.1)
nucl 5, mito 3, chlo 1, cyto_mito 1, mito_plas 1	(predict for XP_069143849.1)

Subcellular
localization
TargetP

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-r.6 for 101246845	sly-u.5 for 101246845	sly-u.5 for 101247445	sly-u.5 for 101247143	sot-r.1 for 102582785	sot-r.1 for 102583780	nta-r.1 for 107796409	nta-r.1 for 107805037	ath-u.5 for AT4G11970	gma-u.5 for 100799369	gma-u.5 for 100784130	bra-r.6 for 103853498	vvi-u.5 for 100254803	ppo-u.5 for 7490930	ghi-r.1 for 107930042	ghi-r.1 for 107926972	bna-r.1 for 106390672	bna-r.1 for 106380571	bna-r.1 for 125586911	cit-r.1 for 102622363	cre-r.1 for CHLRE_12g516400v5