Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-r.6   104649094   pentatricopeptide repeat-containing protein At2g37320 
 sly-u.5   104649094   pentatricopeptide repeat-containing protein At2g37320 
 sot-r.1   102598140   pentatricopeptide repeat-containing protein At2g37320 
 nta-r.1   107764654   pentatricopeptide repeat-containing protein At2g37320-like 
 ath-u.5   AT2G37320   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100813915   pentatricopeptide repeat-containing protein At2g37320 
 bra-r.6   103867206   pentatricopeptide repeat-containing protein At2g37320 
 bra-r.6   103865589   pentatricopeptide repeat-containing protein At2g37320 
 mtr-u.5   11435688   uncharacterized LOC11435688 
 ghi-r.1   107918851   pentatricopeptide repeat-containing protein At2g37320 
 ghi-r.1   107893892   pentatricopeptide repeat-containing protein At2g37320 
 cit-r.1   102607158   pentatricopeptide repeat-containing protein At2g37320 
 osa-u.5   4350271   pentatricopeptide repeat-containing protein At2g37320 
 osa-u.5   4345023   pentatricopeptide repeat-containing protein At2g37320 
 zma-u.5   100274275   uncharacterized LOC100274275 
 zma-u.5   100193547   uncharacterized LOC100193547 
 tae-r.2   123149157   pentatricopeptide repeat-containing protein At2g37320 
 hvu-r.1   123411941   pentatricopeptide repeat-containing protein At2g37320-like 
 sbi-r.1   8060232   pentatricopeptide repeat-containing protein At2g37320 
 bdi-r.1   100830919   pentatricopeptide repeat-containing protein At2g37320 

close


Top 50 coexpressed genes to 104649094 (sly-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 104649094 (sly-r.6 coexpression data)

CoexMap"104649094"


slyLOC104649094 | Entrez gene ID : 104649094    
Species sly sot nta ath gma bra mtr ghi cit osa zma tae hvu sbi bdi cre bna vvi ppo
Paralog 2 1 1 1 1 2 1 2 1 2 2 1 1 1 1 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (280 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5687 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_025888700.2 [sequence] [blastp]
XP_025888701.2 [sequence] [blastp]
XP_025888702.2 [sequence] [blastp]
XP_069145038.1 [sequence] [blastp]
XP_069145039.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3  (predict for XP_025888700.2)
cyto 6,  chlo 1,  plas 1,  nucl 1,  mito 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1  (predict for XP_025888701.2)
cyto 6,  chlo 1,  plas 1,  nucl 1,  mito 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1  (predict for XP_025888702.2)
cyto 6,  chlo 1,  plas 1,  nucl 1,  mito 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1  (predict for XP_069145038.1)
cyto 6,  nucl 3  (predict for XP_069145039.1)
Subcellular
localization
TargetP
other 9  (predict for XP_025888700.2)
other 7,  mito 3  (predict for XP_025888701.2)
other 7,  mito 3  (predict for XP_025888702.2)
other 7,  mito 3  (predict for XP_069145038.1)
other 9  (predict for XP_069145039.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-r.6
for
104649094
sly-u.5
for
104649094
sot-r.1
for
102598140
nta-r.1
for
107764654
ath-u.5
for
AT2G37320
gma-u.5
for
100813915
bra-r.6
for
103867206
bra-r.6
for
103865589
mtr-u.5
for
11435688
ghi-r.1
for
107918851
ghi-r.1
for
107893892
cit-r.1
for
102607158
osa-u.5
for
4350271
osa-u.5
for
4345023
zma-u.5
for
100274275
zma-u.5
for
100193547
tae-r.2
for
123149157
hvu-r.1
for
123411941
sbi-r.1
for
8060232
bdi-r.1
for
100830919


Ortholog ID: 6515
Species sly sot nta ath gma bra bra mtr ghi ghi cit osa osa zma zma tae hvu sbi bdi
Symbol LOC104649094 LOC102598140 LOC107764654 AT2G37320 LOC100813915 LOC103867206 LOC103865589 LOC11435688 LOC107918851 LOC107893892 LOC102607158 LOC4350271 LOC4345023 LOC100274275 LOC100193547 LOC123149157 LOC123411941 LOC8060232 LOC100830919
Function* pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320-like Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320 uncharacterized LOC11435688 pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320 uncharacterized LOC100274275 uncharacterized LOC100193547 pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320-like pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
mtr04626 Plant-pathogen interaction 4
mtr04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma00513 Various types of N-glycan biosynthesis 4
zma00510 N-Glycan biosynthesis 3
zma00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 104649094 102598140 107764654 818309 100813915 103867206 103865589 11435688 107918851 107893892 102607158 4350271 4345023 100274275 100193547 123149157 123411941 8060232 100830919
The preparation time of this page was 0.2 [sec].