ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103867206	pentatricopeptide repeat-containing protein At2g37320
bra-r.6	103865589	pentatricopeptide repeat-containing protein At2g37320
ath-u.5	AT2G37320	Tetratricopeptide repeat (TPR)-like superfamily protein
ghi-r.1	107918851	pentatricopeptide repeat-containing protein At2g37320
ghi-r.1	107893892	pentatricopeptide repeat-containing protein At2g37320
cit-r.1	102607158	pentatricopeptide repeat-containing protein At2g37320
gma-u.5	100813915	pentatricopeptide repeat-containing protein At2g37320
mtr-u.5	11435688	uncharacterized LOC11435688
sly-u.5	104649094	pentatricopeptide repeat-containing protein At2g37320
sot-r.1	102598140	pentatricopeptide repeat-containing protein At2g37320
nta-r.1	107764654	pentatricopeptide repeat-containing protein At2g37320-like
osa-u.5	4350271	pentatricopeptide repeat-containing protein At2g37320
osa-u.5	4345023	pentatricopeptide repeat-containing protein At2g37320
zma-u.5	100274275	uncharacterized LOC100274275
zma-u.5	100193547	uncharacterized LOC100193547
tae-r.2	123149157	pentatricopeptide repeat-containing protein At2g37320
hvu-r.1	123411941	pentatricopeptide repeat-containing protein At2g37320-like
sbi-r.1	8060232	pentatricopeptide repeat-containing protein At2g37320
bdi-r.1	100830919	pentatricopeptide repeat-containing protein At2g37320

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(422 genes)

IEA

GO CC

GO MF

GO:0003723 [list] [network] RNA binding	(1857 genes)	IEA
GO:0005515 [list] [network] protein binding	(6277 genes)	IEA

Protein

XP_009143507.2 [sequence] [blastp]
XP_009143508.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 2, mito 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2	(predict for XP_009143507.2)
cyto 6, chlo 1, nucl 1, mito 1, chlo_mito 1	(predict for XP_009143508.2)

Subcellular
localization
TargetP

other 4, chlo 3	(predict for XP_009143507.2)
other 4, chlo 3	(predict for XP_009143508.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103867206	bra-r.6 for 103865589	ath-u.5 for AT2G37320	ghi-r.1 for 107918851	ghi-r.1 for 107893892	cit-r.1 for 102607158	gma-u.5 for 100813915	mtr-u.5 for 11435688	sly-u.5 for 104649094	sot-r.1 for 102598140	nta-r.1 for 107764654	osa-u.5 for 4350271	osa-u.5 for 4345023	zma-u.5 for 100274275	zma-u.5 for 100193547	tae-r.2 for 123149157	hvu-r.1 for 123411941	sbi-r.1 for 8060232	bdi-r.1 for 100830919

Ortholog

Ortholog ID: 6515

Species

bra

ath

ghi

cit

gma

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*