Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-m.5   100259391   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 vvi-u.5   100259391   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 vvi-r.5   100259391   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 ath-u.5   LOJ   LATERAL ORGAN JUNCTION 
 ath-u.5   AT3G54980   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100777321   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 bra-r.6   103841410   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 ppo-u.5   7495762   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 mtr-u.5   11443262   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 ghi-r.1   107914253   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 ghi-r.1   107897594   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 bna-r.1   106439871   pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like 
 bna-r.1   106412116   pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like 
 cit-r.1   102609583   pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like 
 sly-u.5   101252311   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 sot-r.1   102596962   pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like 
 nta-r.1   107827183   uncharacterized LOC107827183 
 nta-r.1   107829376   uncharacterized LOC107829376 
 nta-r.1   107777250   uncharacterized LOC107777250 

close


Top 50 coexpressed genes to 100259391 (vvi-m.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100259391 (vvi-m.5 coexpression data)

CoexMap"100259391"


vviLOC100259391 | Entrez gene ID : 100259391    
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta sbi osa tae hvu zma cre bdi
Paralog 3 2 1 1 1 1 2 2 1 1 1 3 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_003631789.1 [sequence] [blastp]
XP_010648630.1 [sequence] [blastp]
XP_019074990.1 [sequence] [blastp]
XP_019074992.1 [sequence] [blastp]
XP_019074993.1 [sequence] [blastp]
XP_019074994.1 [sequence] [blastp]
XP_059592215.1 [sequence] [blastp]
XP_059592216.1 [sequence] [blastp]
XP_059592217.1 [sequence] [blastp]
XP_059592218.1 [sequence] [blastp]
XP_059592219.1 [sequence] [blastp]
XP_059592221.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 3  (predict for XP_003631789.1)
chlo 6,  extr 3  (predict for XP_010648630.1)
chlo 6,  extr 3  (predict for XP_019074990.1)
chlo 6,  extr 3  (predict for XP_019074992.1)
chlo 6,  extr 3  (predict for XP_019074993.1)
chlo 6,  extr 3  (predict for XP_019074994.1)
chlo 6,  extr 3  (predict for XP_059592215.1)
chlo 6,  extr 3  (predict for XP_059592216.1)
chlo 6,  extr 3  (predict for XP_059592217.1)
chlo 6,  extr 3  (predict for XP_059592218.1)
chlo 6,  extr 3  (predict for XP_059592219.1)
chlo 6,  extr 3  (predict for XP_059592221.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_003631789.1)
chlo 5  (predict for XP_010648630.1)
chlo 5  (predict for XP_019074990.1)
chlo 5  (predict for XP_019074992.1)
chlo 5  (predict for XP_019074993.1)
chlo 5  (predict for XP_019074994.1)
chlo 5  (predict for XP_059592215.1)
chlo 5  (predict for XP_059592216.1)
chlo 5  (predict for XP_059592217.1)
chlo 5  (predict for XP_059592218.1)
chlo 5  (predict for XP_059592219.1)
chlo 5  (predict for XP_059592221.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-m.5
for
100259391
vvi-u.5
for
100259391
vvi-r.5
for
100259391
ath-u.5
for
LOJ
ath-u.5
for
AT3G54980
gma-u.5
for
100777321
bra-r.6
for
103841410
ppo-u.5
for
7495762
mtr-u.5
for
11443262
ghi-r.1
for
107914253
ghi-r.1
for
107897594
bna-r.1
for
106439871
bna-r.1
for
106412116
cit-r.1
for
102609583
sly-u.5
for
101252311
sot-r.1
for
102596962
nta-r.1
for
107827183
nta-r.1
for
107829376
nta-r.1
for
107777250


Ortholog ID: 12645
Species vvi ath ath gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta nta
Symbol LOC100259391 LOJ AT3G54980 LOC100777321 LOC103841410 LOC7495762 LOC11443262 LOC107914253 LOC107897594 LOC106439871 LOC106412116 LOC102609583 LOC101252311 LOC102596962 LOC107827183 LOC107829376 LOC107777250
Function* pentatricopeptide repeat-containing protein At3g54980, mitochondrial LATERAL ORGAN JUNCTION Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like uncharacterized LOC107827183 uncharacterized LOC107829376 uncharacterized LOC107777250
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100259391 818508 824663 100777321 103841410 7495762 11443262 107914253 107897594 106439871 106412116 102609583 101252311 102596962 107827183 107829376 107777250
The preparation time of this page was 0.1 [sec].