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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   CKB1   casein kinase II beta chain 1 
 ath-u.5   CKB1   casein kinase II beta chain 1 
 ath-r.7   CKB1   casein kinase II beta chain 1 
 ath-m.9   CKB1   casein kinase II beta chain 1 
 ath-e.2   CKB1   casein kinase II beta chain 1 
 ath-m.4.hor   CKB1   casein kinase II beta chain 1 
 ath-m.4.lig   CKB1   casein kinase II beta chain 1 
 ath-m.4.str   CKB1   casein kinase II beta chain 1 
 ath-m.4.tis   CKB1   casein kinase II beta chain 1 
 ath-u.5   CKB4   casein kinase II beta subunit 4 
 ath-u.5   CKB3   casein kinase II beta chain 3 
 ath-u.5   CKB2   casein kinase II beta chain 2 
 bra-r.6   103830251   casein kinase II subunit beta-3 
 bra-r.6   103866823   putative casein kinase II subunit beta-4 
 bra-r.6   103841878   casein kinase II subunit beta-3 
 bna-r.1   125584339   putative casein kinase II subunit beta-4 
 bna-r.1   106413504   casein kinase II subunit beta-1 
 bna-r.1   106353123   casein kinase II subunit beta-3 
 ghi-r.1   107919855   casein kinase II subunit beta-1 
 ghi-r.1   107923391   putative casein kinase II subunit beta-4 
 ghi-r.1   107924805   casein kinase II subunit beta-2 
 cit-r.1   102618939   casein kinase II subunit beta-1 
 cit-r.1   102621387   casein kinase II subunit beta-1 
 gma-u.5   100784848   putative casein kinase II subunit beta 
 gma-u.5   100780095   putative casein kinase II subunit beta 
 gma-u.5   100784315   putative casein kinase II subunit beta 
 vvi-u.5   100262569   putative casein kinase II subunit beta-4 
 vvi-u.5   100266745   putative casein kinase II subunit beta-4 
 ppo-u.5   7483807   putative casein kinase II subunit beta-4 
 ppo-u.5   18105101   putative casein kinase II subunit beta-4 
 ppo-u.5   18096905   casein kinase II subunit beta-2 
 mtr-u.5   25493577   casein kinase II subunit beta-1 
 mtr-u.5   11430161   casein kinase II subunit beta-1 
 sly-u.5   101245655   putative casein kinase II subunit beta-4 
 sly-u.5   101246833   casein kinase II subunit beta-3 
 sly-u.5   101249856   putative casein kinase II subunit beta-4 
 sot-r.1   102591581   putative casein kinase II subunit beta-4 
 sot-r.1   102594940   putative casein kinase II subunit beta-4 
 sot-r.1   102597719   putative casein kinase II subunit beta-4 
 nta-r.1   107815247   putative casein kinase II subunit beta-4 
 nta-r.1   107812461   putative casein kinase II subunit beta-4 
 nta-r.1   107770532   putative casein kinase II subunit beta-4 
 osa-u.5   4349414   putative casein kinase II subunit beta-4 
 osa-u.5   4343287   putative casein kinase II subunit beta-4 
 zma-u.5   541823   CK2 regulatory subunit B1 
 zma-u.5   100283448   casein kinase II subunit beta-4 
 zma-u.5   542628   uncharacterized LOC542628 
 tae-r.2   123046191   casein kinase II subunit beta-1 
 tae-r.2   123054069   casein kinase II subunit beta-1 
 tae-r.2   123052124   putative casein kinase II subunit beta-4 
 hvu-r.1   123439104   putative casein kinase II subunit beta-4 
 hvu-r.1   123450082   putative casein kinase II subunit beta-4 
 hvu-r.1   123427395   casein kinase II subunit beta-1-like 
 sbi-r.1   110436372   casein kinase II subunit beta-1-like 
 sbi-r.1   110432853   putative casein kinase II subunit beta-4 
 sbi-r.1   110431830   putative casein kinase II subunit beta-4 
 bdi-r.1   100839492   putative casein kinase II subunit beta-4 
 bdi-r.1   100821861   putative casein kinase II subunit beta-4 
 bdi-r.1   100827500   casein kinase II subunit beta-1 
 cre-r.1   CHLRE_01g016556v5   uncharacterized protein 

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Top 50 coexpressed genes to CKB1 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CKB1 (ath-m.4.bio coexpression data)

CoexMap"834754"


athCKB1 | Entrez gene ID : 834754      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 3 3 3 2 3 2 3 2 3 3 3 2 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
ath03083 [list] [network] Polycomb repressive complex (65 genes)
ath04712 [list] [network] Circadian rhythm - plant (43 genes)
GO BP
GO:0010017 [list] [network] red or far-red light signaling pathway  (53 genes)  IDA  
GO:0006468 [list] [network] protein phosphorylation  (345 genes)  IDA  
GO CC
GO:0005956 [list] [network] protein kinase CK2 complex  (3 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0019887 [list] [network] protein kinase regulator activity  (37 genes)  IDA IGI  
GO:0004674 [list] [network] protein serine/threonine kinase activity  (433 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001032026.1 [sequence] [blastp]
NP_001190483.1 [sequence] [blastp]
NP_199519.1 [sequence] [blastp]
NP_974896.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  cyto_nucl 3,  cyto 2,  nucl_plas 2  (predict for NP_001032026.1)
nucl 6,  nucl_plas 4,  cyto 2,  chlo 1  (predict for NP_001190483.1)
nucl 5,  nucl_plas 3,  cyto 2,  chlo 1  (predict for NP_199519.1)
nucl 4,  chlo 4,  cyto_nucl 3,  nucl_plas 2,  cyto 1,  chlo_mito 1  (predict for NP_974896.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for NP_001032026.1)
other 5  (predict for NP_001190483.1)
other 5  (predict for NP_199519.1)
other 5  (predict for NP_974896.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
CKB1
ath-u.5
for
CKB1
ath-r.7
for
CKB1
ath-m.9
for
CKB1
ath-e.2
for
CKB1
ath-m.4.hor
for
CKB1
ath-m.4.lig
for
CKB1
ath-m.4.str
for
CKB1
ath-m.4.tis
for
CKB1
ath-u.5
for
CKB4
ath-u.5
for
CKB3
ath-u.5
for
CKB2
bra-r.6
for
103830251
bra-r.6
for
103866823
bra-r.6
for
103841878
bna-r.1
for
125584339
bna-r.1
for
106413504
bna-r.1
for
106353123
ghi-r.1
for
107919855
ghi-r.1
for
107923391
ghi-r.1
for
107924805
cit-r.1
for
102618939
cit-r.1
for
102621387
gma-u.5
for
100784848
gma-u.5
for
100780095
gma-u.5
for
100784315
vvi-u.5
for
100262569
vvi-u.5
for
100266745
ppo-u.5
for
7483807
ppo-u.5
for
18105101
ppo-u.5
for
18096905
mtr-u.5
for
25493577
mtr-u.5
for
11430161
sly-u.5
for
101245655
sly-u.5
for
101246833
sly-u.5
for
101249856
sot-r.1
for
102591581
sot-r.1
for
102594940
sot-r.1
for
102597719
nta-r.1
for
107815247
nta-r.1
for
107812461
nta-r.1
for
107770532
osa-u.5
for
4349414
osa-u.5
for
4343287
zma-u.5
for
541823
zma-u.5
for
100283448
zma-u.5
for
542628
tae-r.2
for
123046191
tae-r.2
for
123054069
tae-r.2
for
123052124
hvu-r.1
for
123439104
hvu-r.1
for
123450082
hvu-r.1
for
123427395
sbi-r.1
for
110436372
sbi-r.1
for
110432853
sbi-r.1
for
110431830
bdi-r.1
for
100839492
bdi-r.1
for
100821861
bdi-r.1
for
100827500
cre-r.1
for
CHLRE_01g016556v5


Ortholog ID: 877
Species ath ath ath bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol CKB4 CKB3 CKB2 LOC103841878 LOC103860926 LOC106414855 LOC106415652 LOC106440228 LOC107926305 LOC107933739 LOC107912198 LOC102618939 LOC102621387 LOC100780095 LOC100789357 LOC100799304 LOC100262569 LOC100266745 LOC18105101 LOC18096905 LOC18096766 LOC25493577 LOC11430161 LOC101246833 LOC101249856 LOC101257119 LOC102591581 LOC102597719 LOC102600211 LOC107815247 LOC107772947 LOC107783425 LOC4349414 LOC4343287 LOC541823 LOC100283448 LOC541824 LOC123046191 LOC123099180 LOC123172147 LOC123439104 LOC123427395 LOC123426079 LOC110436372 LOC110432853 LOC110431830 LOC100839492 LOC100821861 LOC100827500 CHLRE_01g016556v5
Function* casein kinase II beta subunit 4 casein kinase II beta chain 3 casein kinase II beta chain 2 casein kinase II subunit beta-3 casein kinase II subunit beta-2 casein kinase II subunit beta-2 casein kinase II subunit beta-3 casein kinase II subunit beta-2 casein kinase II subunit beta-1 casein kinase II subunit beta-2 casein kinase II subunit beta-2 casein kinase II subunit beta-1 casein kinase II subunit beta-1 putative casein kinase II subunit beta putative casein kinase II subunit beta putative casein kinase II subunit beta putative casein kinase II subunit beta-4 putative casein kinase II subunit beta-4 putative casein kinase II subunit beta-4 casein kinase II subunit beta-2 casein kinase II subunit beta-2 casein kinase II subunit beta-1 casein kinase II subunit beta-1 casein kinase II subunit beta-3 putative casein kinase II subunit beta-4 putative casein kinase II subunit beta-4 putative casein kinase II subunit beta-4 putative casein kinase II subunit beta-4 casein kinase II subunit beta-3-like putative casein kinase II subunit beta-4 casein kinase II subunit beta-3 casein kinase II subunit beta-1 putative casein kinase II subunit beta-4 putative casein kinase II subunit beta-4 CK2 regulatory subunit B1 casein kinase II subunit beta-4 casein kinase II subunit beta-4 casein kinase II subunit beta-1 putative casein kinase II subunit beta-4 putative casein kinase II subunit beta-4 putative casein kinase II subunit beta-4 casein kinase II subunit beta-1-like putative casein kinase II subunit beta-4 casein kinase II subunit beta-1-like putative casein kinase II subunit beta-4 putative casein kinase II subunit beta-4 putative casein kinase II subunit beta-4 putative casein kinase II subunit beta-4 casein kinase II subunit beta-1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath03083 Polycomb repressive complex 2
ath04712 Circadian rhythm - plant 2
ath04144 Endocytosis 2
ath04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath04712 Circadian rhythm - plant 4
ath03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03250 Viral life cycle - HIV-1 2
bra03008 Ribosome biogenesis in eukaryotes 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03083 Polycomb repressive complex 4
bna04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03083 Polycomb repressive complex 4
bna04712 Circadian rhythm - plant 4
bna00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03083 Polycomb repressive complex 4
bna04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi03083 Polycomb repressive complex 6
ghi04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
ghi03083 Polycomb repressive complex 8
ghi04712 Circadian rhythm - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
ghi03083 Polycomb repressive complex 8
ghi04712 Circadian rhythm - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 4
cit03015 mRNA surveillance pathway 3
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 3
gma03083 Polycomb repressive complex 3
gma01200 Carbon metabolism 2
gma03008 Ribosome biogenesis in eukaryotes 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 7
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma03018 RNA degradation 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03083 Polycomb repressive complex 2
gma04712 Circadian rhythm - plant 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
ppo04145 Phagosome 2
ppo04517 IgSF CAM signaling 2
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 6
ppo04120 Ubiquitin mediated proteolysis 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 5
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03083 Polycomb repressive complex 2
mtr04712 Circadian rhythm - plant 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 8
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03083 Polycomb repressive complex 2
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04120 Ubiquitin mediated proteolysis 3
sly04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03008 Ribosome biogenesis in eukaryotes 3
sly03083 Polycomb repressive complex 3
sly04712 Circadian rhythm - plant 3
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03083 Polycomb repressive complex 3
sly04712 Circadian rhythm - plant 3
sly03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot03083 Polycomb repressive complex 3
sot04712 Circadian rhythm - plant 3
sot03018 RNA degradation 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot03008 Ribosome biogenesis in eukaryotes 3
sot03083 Polycomb repressive complex 3
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 6
nta03008 Ribosome biogenesis in eukaryotes 4
nta03083 Polycomb repressive complex 4
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03083 Polycomb repressive complex 2
nta04712 Circadian rhythm - plant 2
nta03040 Spliceosome 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 8
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
nta03083 Polycomb repressive complex 2
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
osa03040 Spliceosome 2
osa03008 Ribosome biogenesis in eukaryotes 2
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03420 Nucleotide excision repair 2
osa03008 Ribosome biogenesis in eukaryotes 2
osa03083 Polycomb repressive complex 2
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
zma03250 Viral life cycle - HIV-1 2
zma03272 Virion - Hepatitis viruses 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 6
zma03008 Ribosome biogenesis in eukaryotes 3
zma03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 4
zma03008 Ribosome biogenesis in eukaryotes 3
zma03083 Polycomb repressive complex 3
zma03015 mRNA surveillance pathway 2
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 6
tae04144 Endocytosis 3
tae03008 Ribosome biogenesis in eukaryotes 3
tae03083 Polycomb repressive complex 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03083 Polycomb repressive complex 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03083 Polycomb repressive complex 4
tae04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00020 Citrate cycle (TCA cycle) 2
sbi01200 Carbon metabolism 2
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 2
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
cre03008 Ribosome biogenesis in eukaryotes 2
cre04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
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