ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	102597719	putative casein kinase II subunit beta-4
sly-u.5	101257119	putative casein kinase II subunit beta-4
sly-u.5	101249856	putative casein kinase II subunit beta-4
sly-u.5	101246833	casein kinase II subunit beta-3
ath-u.5	CKB2	casein kinase II beta chain 2
ath-u.5	CKB4	casein kinase II beta subunit 4
ath-u.5	CKB3	casein kinase II beta chain 3
gma-u.5	100793573	putative casein kinase II subunit beta-4
gma-u.5	100784848	putative casein kinase II subunit beta
gma-u.5	100799304	putative casein kinase II subunit beta
vvi-u.5	100266745	putative casein kinase II subunit beta-4
vvi-u.5	100262569	putative casein kinase II subunit beta-4
ppo-u.5	18096905	casein kinase II subunit beta-2
ppo-u.5	18105101	putative casein kinase II subunit beta-4
ppo-u.5	18096766	casein kinase II subunit beta-2
mtr-u.5	25493577	casein kinase II subunit beta-1
mtr-u.5	11430161	casein kinase II subunit beta-1
osa-u.5	4343287	putative casein kinase II subunit beta-4
osa-u.5	4349414	putative casein kinase II subunit beta-4
zma-u.5	541824	casein kinase II subunit beta-4
zma-u.5	542628	uncharacterized LOC542628
zma-u.5	100283448	casein kinase II subunit beta-4

Top 50 coexpressed genes to 102597719 (sot-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102597719 (sot-r.1 coexpression data)

CoexMap"102597719"

[Cytoscape]

Annotation

functional annotation

KEGG

sot03008 [list] [network] Ribosome biogenesis in eukaryotes (88 genes)

sot03083 [list] [network] Polycomb repressive complex (84 genes)

sot04712 [list] [network] Circadian rhythm - plant (52 genes)

GO BP

GO CC

GO:0005956 [list] [network] protein kinase CK2 complex	(8 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(4349 genes)	IEA

GO MF

GO:0019887 [list] [network] protein kinase regulator activity

(67 genes)

IEA

Protein

XP_006345541.1 [sequence] [blastp]
XP_006345542.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9	(predict for XP_006345541.1)
nucl 9	(predict for XP_006345542.1)

Subcellular
localization
TargetP

other 7	(predict for XP_006345541.1)
other 7	(predict for XP_006345542.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102597719	sly-u.5 for 101257119	sly-u.5 for 101249856	sly-u.5 for 101246833	ath-u.5 for CKB2	ath-u.5 for CKB4	ath-u.5 for CKB3	gma-u.5 for 100793573	gma-u.5 for 100784848	gma-u.5 for 100799304	vvi-u.5 for 100266745	vvi-u.5 for 100262569	ppo-u.5 for 18096905	ppo-u.5 for 18105101	ppo-u.5 for 18096766	mtr-u.5 for 25493577	mtr-u.5 for 11430161	osa-u.5 for 4343287	osa-u.5 for 4349414	zma-u.5 for 541824	zma-u.5 for 542628	zma-u.5 for 100283448

Ortholog

Ortholog ID: 877

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

CKB2

CKB3

Function^*

casein kinase II subunit beta-3-like

putative casein kinase II subunit beta-4

casein kinase II subunit beta-3

casein kinase II subunit beta-1

casein kinase II subunit beta-3

casein kinase II beta chain 2

casein kinase II beta chain 3

putative casein kinase II subunit beta

casein kinase II subunit beta-3

putative casein kinase II subunit beta-4

casein kinase II subunit beta-2

putative casein kinase II subunit beta-4

casein kinase II subunit beta-1

casein kinase II subunit beta-2

casein kinase II subunit beta-1

casein kinase II subunit beta-2

casein kinase II subunit beta-1

putative casein kinase II subunit beta-4

casein kinase II subunit beta-4

CK2 regulatory subunit B1

putative casein kinase II subunit beta-4

casein kinase II subunit beta-1

putative casein kinase II subunit beta-4

casein kinase II subunit beta-1-like

putative casein kinase II subunit beta-4

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3
sot03008	Ribosome biogenesis in eukaryotes	3
sot03083	Polycomb repressive complex	3
sot04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	3
sly03008	Ribosome biogenesis in eukaryotes	3
sly03083	Polycomb repressive complex	3
sly04712	Circadian rhythm - plant	3
sly03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3
sly04120	Ubiquitin mediated proteolysis	3
sly04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	8
nta03040	Spliceosome	4
nta03008	Ribosome biogenesis in eukaryotes	2
nta03083	Polycomb repressive complex	2
nta04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03083	Polycomb repressive complex	2
nta04712	Circadian rhythm - plant	2
nta03040	Spliceosome	2
nta01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	4
ath04712	Circadian rhythm - plant	4
ath03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03050	Proteasome	3
gma03083	Polycomb repressive complex	3
gma01200	Carbon metabolism	2
gma03008	Ribosome biogenesis in eukaryotes	2
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	2
gma03083	Polycomb repressive complex	2
gma04712	Circadian rhythm - plant	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	2
ppo04145	Phagosome	2
ppo04517	IgSF CAM signaling	2
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	8
mtr03008	Ribosome biogenesis in eukaryotes	2
mtr03083	Polycomb repressive complex	2
mtr04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	5
mtr03008	Ribosome biogenesis in eukaryotes	2
mtr03083	Polycomb repressive complex	2
mtr04712	Circadian rhythm - plant	2
mtr03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	8
ghi03083	Polycomb repressive complex	8
ghi04712	Circadian rhythm - plant	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	6
ghi03083	Polycomb repressive complex	6
ghi04712	Circadian rhythm - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	4
bna03083	Polycomb repressive complex	4
bna04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	4
bna03083	Polycomb repressive complex	4
bna04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03083	Polycomb repressive complex	2
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04712	Circadian rhythm - plant	4
cit03015	mRNA surveillance pathway	3
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	3
osa03040	Spliceosome	2
osa03008	Ribosome biogenesis in eukaryotes	2
osa03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03420	Nucleotide excision repair	2
osa03008	Ribosome biogenesis in eukaryotes	2
osa03083	Polycomb repressive complex	2
osa04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	6
zma03008	Ribosome biogenesis in eukaryotes	3
zma03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	2
zma03250	Viral life cycle - HIV-1	2
zma03272	Virion - Hepatitis viruses	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	3
tae03083	Polycomb repressive complex	3
tae04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03022	Basal transcription factors	6
tae04144	Endocytosis	3
tae03008	Ribosome biogenesis in eukaryotes	3
tae03083	Polycomb repressive complex	3
tae04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	2
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	5
cre03008	Ribosome biogenesis in eukaryotes	2
cre04712	Circadian rhythm - plant	2

Expression

Expression pattern

Entrez Gene ID^*

102600211

102597719

101249856

101246833

107783425

107772947

827484

825196

100780095

100799304

103841878

100262569

100266745

18096905

18105101

11430161

25493577

107912198

107926305

106414855

106440228

102618939

102621387

4349414

4343287

100283448

541823

123099180

123046191

123439104

123426079

110436372

110432853

100839492

100821861

5715130

The preparation time of this page was 0.1 [sec].


Species	sot	sly	ath	gma	vvi	ppo	mtr	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	nta	cre	tae
Paralog	1	3	3	3	2	3	2	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102597719 (sot-r.1 coexpression data)

Top 50 enrichment test to 102597719 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**