ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	110431830	putative casein kinase II subunit beta-4
sbi-r.1	110432853	putative casein kinase II subunit beta-4
sbi-r.1	110436372	casein kinase II subunit beta-1-like
zma-u.5	541824	casein kinase II subunit beta-4
zma-u.5	542628	uncharacterized LOC542628
zma-u.5	100283448	casein kinase II subunit beta-4
osa-u.5	4343287	putative casein kinase II subunit beta-4
osa-u.5	4349414	putative casein kinase II subunit beta-4
tae-r.2	123052750	putative casein kinase II subunit beta-4
tae-r.2	123189958	casein kinase II subunit beta-1
tae-r.2	123099180	putative casein kinase II subunit beta-4
hvu-r.1	123450082	putative casein kinase II subunit beta-4
hvu-r.1	123439104	putative casein kinase II subunit beta-4
hvu-r.1	123427395	casein kinase II subunit beta-1-like
bdi-r.1	100839492	putative casein kinase II subunit beta-4
bdi-r.1	100827500	casein kinase II subunit beta-1
bdi-r.1	100821861	putative casein kinase II subunit beta-4
ath-u.5	CKB2	casein kinase II beta chain 2
ath-u.5	CKB4	casein kinase II beta subunit 4
ath-u.5	CKB3	casein kinase II beta chain 3
gma-u.5	100793573	putative casein kinase II subunit beta-4
gma-u.5	100784848	putative casein kinase II subunit beta
gma-u.5	100799304	putative casein kinase II subunit beta
sly-u.5	101257119	putative casein kinase II subunit beta-4
sly-u.5	101249856	putative casein kinase II subunit beta-4
sly-u.5	101246833	casein kinase II subunit beta-3
bra-r.6	103855586	casein kinase II subunit beta-2
bra-r.6	103866823	putative casein kinase II subunit beta-4
bra-r.6	103860926	casein kinase II subunit beta-2
vvi-u.5	100262569	putative casein kinase II subunit beta-4
vvi-u.5	100266745	putative casein kinase II subunit beta-4
ppo-u.5	18096766	casein kinase II subunit beta-2
ppo-u.5	18105101	putative casein kinase II subunit beta-4
ppo-u.5	18096905	casein kinase II subunit beta-2
mtr-u.5	11430161	casein kinase II subunit beta-1
mtr-u.5	25493577	casein kinase II subunit beta-1
ghi-r.1	107929691	casein kinase II subunit beta-1
ghi-r.1	107926305	casein kinase II subunit beta-1
ghi-r.1	107924805	casein kinase II subunit beta-2
bna-r.1	125584339	putative casein kinase II subunit beta-4
bna-r.1	106402474	casein kinase II subunit beta-3
bna-r.1	106353123	casein kinase II subunit beta-3
sot-r.1	102597719	putative casein kinase II subunit beta-4
sot-r.1	102600211	casein kinase II subunit beta-3-like
sot-r.1	102591581	putative casein kinase II subunit beta-4
cit-r.1	102621387	casein kinase II subunit beta-1
cit-r.1	102618939	casein kinase II subunit beta-1
nta-r.1	107812461	putative casein kinase II subunit beta-4
nta-r.1	107787206	putative casein kinase II subunit beta-4
nta-r.1	107783425	casein kinase II subunit beta-1
cre-r.1	CHLRE_01g016556v5	uncharacterized protein

Top 50 coexpressed genes to 110431830 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 110431830 (sbi-r.1 coexpression data)

CoexMap"110431830"

[Cytoscape]

Annotation

functional annotation

KEGG

sbi03008 [list] [network] Ribosome biogenesis in eukaryotes (91 genes)

sbi03083 [list] [network] Polycomb repressive complex (59 genes)

sbi04712 [list] [network] Circadian rhythm - plant (54 genes)

GO BP

GO CC

GO:0005956 [list] [network] protein kinase CK2 complex	(6 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(4816 genes)	IEA

GO MF

GO:0019887 [list] [network] protein kinase regulator activity

(76 genes)

IEA

Protein

XP_021307176.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, nucl_plas 3, cyto 3, mito 1, extr 1

(predict for XP_021307176.1)

Subcellular
localization
TargetP

other 5, mito 3

(predict for XP_021307176.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 110431830	sbi-r.1 for 110432853	sbi-r.1 for 110436372	zma-u.5 for 541824	zma-u.5 for 542628	zma-u.5 for 100283448	osa-u.5 for 4343287	osa-u.5 for 4349414	tae-r.2 for 123052750	tae-r.2 for 123189958	tae-r.2 for 123099180	hvu-r.1 for 123450082	hvu-r.1 for 123439104	hvu-r.1 for 123427395	bdi-r.1 for 100839492	bdi-r.1 for 100827500	bdi-r.1 for 100821861	ath-u.5 for CKB2	ath-u.5 for CKB4	ath-u.5 for CKB3	gma-u.5 for 100793573	gma-u.5 for 100784848	gma-u.5 for 100799304	sly-u.5 for 101257119	sly-u.5 for 101249856	sly-u.5 for 101246833	bra-r.6 for 103855586	bra-r.6 for 103866823	bra-r.6 for 103860926	vvi-u.5 for 100262569	vvi-u.5 for 100266745	ppo-u.5 for 18096766	ppo-u.5 for 18105101	ppo-u.5 for 18096905	mtr-u.5 for 11430161	mtr-u.5 for 25493577	ghi-r.1 for 107929691	ghi-r.1 for 107926305	ghi-r.1 for 107924805	bna-r.1 for 125584339	bna-r.1 for 106402474	bna-r.1 for 106353123	sot-r.1 for 102597719	sot-r.1 for 102600211	sot-r.1 for 102591581	cit-r.1 for 102621387	cit-r.1 for 102618939	nta-r.1 for 107812461	nta-r.1 for 107787206	nta-r.1 for 107783425	cre-r.1 for CHLRE_01g016556v5

Ortholog

Ortholog ID: 877

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

CKB2

CKB4

CKB3

Function^*