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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-r.5   100249195   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 vvi-u.5   100249195   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 vvi-m.5   100249195   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ppo-u.5   18107681   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 ghi-r.1   107894367   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ghi-r.1   107919193   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 cit-r.1   102620716   pentatricopeptide repeat-containing protein At2g33680-like 
 sly-u.5   101259070   pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like 
 sot-r.1   102587709   pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like 
 nta-r.1   107772424   pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like 
 nta-r.1   107766694   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 osa-u.5   4324596   putative pentatricopeptide repeat-containing protein At3g25970 
 hvu-r.1   123443832   pentatricopeptide repeat-containing protein At4g13650-like 
 bdi-r.1   100827058   pentatricopeptide repeat-containing protein At4g13650 

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Top 50 coexpressed genes to 100249195 (vvi-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100249195 (vvi-r.5 coexpression data)

CoexMap"100249195"


vviLOC100249195 | Entrez gene ID : 100249195      
Species vvi ppo ghi cit sly sot nta osa hvu bdi sbi gma mtr bra tae ath bna zma cre
Paralog 3 1 2 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010656221.1 [sequence] [blastp]
XP_019078527.1 [sequence] [blastp]
XP_019078528.1 [sequence] [blastp]
XP_059596726.1 [sequence] [blastp]
XP_059596727.1 [sequence] [blastp]
XP_059596728.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  chlo 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_010656221.1)
nucl 5,  cyto 3,  chlo 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_019078527.1)
nucl 5,  cyto 3,  chlo 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_019078528.1)
nucl 5,  cyto 3,  chlo 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_059596726.1)
nucl 5,  cyto 3,  chlo 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_059596727.1)
nucl 5,  cyto 3,  chlo 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_059596728.1)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for XP_010656221.1)
chlo 5,  other 3  (predict for XP_019078527.1)
chlo 5,  other 3  (predict for XP_019078528.1)
chlo 5,  other 3  (predict for XP_059596726.1)
chlo 5,  other 3  (predict for XP_059596727.1)
chlo 5,  other 3  (predict for XP_059596728.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-r.5
for
100249195
vvi-u.5
for
100249195
vvi-m.5
for
100249195
ppo-u.5
for
18107681
ghi-r.1
for
107894367
ghi-r.1
for
107919193
cit-r.1
for
102620716
sly-u.5
for
101259070
sot-r.1
for
102587709
nta-r.1
for
107772424
nta-r.1
for
107766694
osa-u.5
for
4324596
hvu-r.1
for
123443832
bdi-r.1
for
100827058


Ortholog ID: 13797
Species vvi ppo ghi ghi cit sly sot nta nta osa hvu bdi
Symbol LOC100249195 LOC18107681 LOC107894367 LOC107919193 LOC102620716 LOC101259070 LOC102587709 LOC107772424 LOC107766694 LOC4324596 LOC123443832 LOC100827058
Function* pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At2g33680-like pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like pentatricopeptide repeat-containing protein At2g03880, mitochondrial putative pentatricopeptide repeat-containing protein At3g25970 pentatricopeptide repeat-containing protein At4g13650-like pentatricopeptide repeat-containing protein At4g13650
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100249195 18107681 107894367 107919193 102620716 101259070 102587709 107772424 107766694 4324596 123443832 100827058
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