Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1  123443832  pentatricopeptide repeat-containing protein At4g13650-like 
 bdi-r.1  100827058  pentatricopeptide repeat-containing protein At4g13650 
 osa-u.5  4324596  putative pentatricopeptide repeat-containing protein At3g25970 
 sly-u.5  101259070  pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like 
 vvi-u.5  100249195  pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ppo-u.5  18107681  pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 ghi-r.1  107894367  pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ghi-r.1  107919193  pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 sot-r.1  102587709  pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like 
 cit-r.1  102620716  pentatricopeptide repeat-containing protein At2g33680-like 
 nta-r.1  107766694  pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 nta-r.1  107772424  pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like 

close


Top 50 coexpressed genes to 123443832 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 123443832 (hvu-r.1 coexpression data)

CoexMap"123443832"


hvuLOC123443832 | Entrez gene ID : 123443832
Species hvu bdi osa sly vvi ppo ghi sot cit nta gma zma bra cre sbi ath tae mtr bna
Paralog 1 1 1 1 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (393 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1359 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044976294.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 4,  cysk 1  (predict for XP_044976294.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_044976294.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

hvu-r.1
for
123443832


bdi-r.1
for
100827058


osa-u.5
for
4324596


sly-u.5
for
101259070


vvi-u.5
for
100249195


ppo-u.5
for
18107681


ghi-r.1
for
107894367


ghi-r.1
for
107919193


sot-r.1
for
102587709


cit-r.1
for
102620716


nta-r.1
for
107766694


nta-r.1
for
107772424



Ortholog ID: 13797
Species hvu bdi osa sly vvi ppo ghi ghi sot cit nta nta
Symbol LOC123443832 LOC100827058 LOC4324596 LOC101259070 LOC100249195 LOC18107681 LOC107894367 LOC107919193 LOC102587709 LOC102620716 LOC107766694 LOC107772424
Function* pentatricopeptide repeat-containing protein At4g13650-like pentatricopeptide repeat-containing protein At4g13650 putative pentatricopeptide repeat-containing protein At3g25970 pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like pentatricopeptide repeat-containing protein At2g33680-like pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123443832 100827058 4324596 101259070 100249195 18107681 107894367 107919193 102587709 102620716 107766694 107772424
The preparation time of this page was 0.1 [sec].