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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107772424   pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like 
 nta-r.1   107766694   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 sly-u.5   101259070   pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like 
 sot-r.1   102587709   pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like 
 vvi-u.5   100249195   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ppo-u.5   18107681   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 ghi-r.1   107894367   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ghi-r.1   107919193   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 cit-r.1   102620716   pentatricopeptide repeat-containing protein At2g33680-like 
 osa-u.5   4324596   putative pentatricopeptide repeat-containing protein At3g25970 
 hvu-r.1   123443832   pentatricopeptide repeat-containing protein At4g13650-like 
 bdi-r.1   100827058   pentatricopeptide repeat-containing protein At4g13650 

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Top 50 coexpressed genes to 107772424 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107772424 (nta-r.1 coexpression data)

CoexMap"107772424"


ntaLOC107772424 | Entrez gene ID : 107772424      
Species nta sly sot vvi ppo ghi cit osa hvu bdi tae bna zma cre mtr sbi gma bra ath
Paralog 2 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (9561 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016447411.2 [sequence] [blastp]
XP_016447412.2 [sequence] [blastp]
XP_016447415.2 [sequence] [blastp]
XP_016447417.2 [sequence] [blastp]
XP_016447418.2 [sequence] [blastp]
XP_016447419.2 [sequence] [blastp]
XP_016447421.2 [sequence] [blastp]
XP_075089802.1 [sequence] [blastp]
XP_075089803.1 [sequence] [blastp]
XP_075089806.1 [sequence] [blastp]
XP_075089807.1 [sequence] [blastp]
XP_075089813.1 [sequence] [blastp]
XP_075089814.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_016447411.2)
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_016447412.2)
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_016447415.2)
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_016447417.2)
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_016447418.2)
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_016447419.2)
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_016447421.2)
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_075089802.1)
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_075089803.1)
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_075089806.1)
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_075089807.1)
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_075089813.1)
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_075089814.1)
Subcellular
localization
TargetP
other 5  (predict for XP_016447411.2)
other 5  (predict for XP_016447412.2)
other 5  (predict for XP_016447415.2)
other 5  (predict for XP_016447417.2)
other 5  (predict for XP_016447418.2)
other 5  (predict for XP_016447419.2)
other 5  (predict for XP_016447421.2)
other 5  (predict for XP_075089802.1)
other 5  (predict for XP_075089803.1)
other 5  (predict for XP_075089806.1)
other 5  (predict for XP_075089807.1)
other 5  (predict for XP_075089813.1)
other 5  (predict for XP_075089814.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107772424
nta-r.1
for
107766694
sly-u.5
for
101259070
sot-r.1
for
102587709
vvi-u.5
for
100249195
ppo-u.5
for
18107681
ghi-r.1
for
107894367
ghi-r.1
for
107919193
cit-r.1
for
102620716
osa-u.5
for
4324596
hvu-r.1
for
123443832
bdi-r.1
for
100827058


Ortholog ID: 13797
Species nta nta sly sot vvi ppo ghi ghi cit osa hvu bdi
Symbol LOC107772424 LOC107766694 LOC101259070 LOC102587709 LOC100249195 LOC18107681 LOC107894367 LOC107919193 LOC102620716 LOC4324596 LOC123443832 LOC100827058
Function* pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At2g33680-like putative pentatricopeptide repeat-containing protein At3g25970 pentatricopeptide repeat-containing protein At4g13650-like pentatricopeptide repeat-containing protein At4g13650
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107772424 107766694 101259070 102587709 100249195 18107681 107894367 107919193 102620716 4324596 123443832 100827058
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