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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101259070   pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like 
 sly-r.6   101259070   pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like 
 vvi-u.5   100249195   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ppo-u.5   18107681   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 osa-u.5   4324596   putative pentatricopeptide repeat-containing protein At3g25970 

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Top 50 coexpressed genes to 101259070 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101259070 (sly-u.5 coexpression data)

CoexMap"101259070"


slyLOC101259070 | Entrez gene ID : 101259070      
Species sly vvi ppo osa hvu zma bna cit bra ghi mtr sbi bdi ath nta gma tae cre sot
Paralog 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (280 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5687 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_010315403.1 [sequence] [blastp]
XP_019069391.1 [sequence] [blastp]
XP_069152139.1 [sequence] [blastp]
XP_069152144.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  plas 2,  nucl_plas 2  (predict for XP_010315403.1)
chlo 3,  nucl 2,  plas 2,  nucl_plas 2  (predict for XP_019069391.1)
chlo 3,  nucl 2,  plas 2,  nucl_plas 2  (predict for XP_069152139.1)
chlo 3,  nucl 2,  plas 2,  nucl_plas 2  (predict for XP_069152144.1)
Subcellular
localization
TargetP
mito 3,  other 3  (predict for XP_010315403.1)
mito 3,  other 3  (predict for XP_019069391.1)
mito 3,  other 3  (predict for XP_069152139.1)
mito 3,  other 3  (predict for XP_069152144.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101259070
sly-r.6
for
101259070
vvi-u.5
for
100249195
ppo-u.5
for
18107681
osa-u.5
for
4324596


Ortholog ID: 13797
Species sly sot nta nta vvi ppo ghi ghi cit osa hvu bdi
Symbol LOC101259070 LOC102587709 LOC107772424 LOC107766694 LOC100249195 LOC18107681 LOC107919193 LOC107894367 LOC102620716 LOC4324596 LOC123443832 LOC100827058
Function* pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At2g33680-like putative pentatricopeptide repeat-containing protein At3g25970 pentatricopeptide repeat-containing protein At4g13650-like pentatricopeptide repeat-containing protein At4g13650
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101259070 102587709 107772424 107766694 100249195 18107681 107919193 107894367 102620716 4324596 123443832 100827058
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