ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-r.6	100285432	tetratricopeptide-like helical
zma-u.5	100285432	tetratricopeptide-like helical
hvu-r.1	123444938	pentatricopeptide repeat-containing protein At5g42450, mitochondrial
ath-u.5	AT5G42450	Pentatricopeptide repeat (PPR) superfamily protein
sly-u.5	104649097	pentatricopeptide repeat-containing protein At5g42450, mitochondrial
bra-r.6	103848549	pentatricopeptide repeat-containing protein At5g42450, mitochondrial
vvi-u.5	100265489	pentatricopeptide repeat-containing protein At5g42450, mitochondrial
mtr-u.5	25488563	pentatricopeptide repeat-containing protein At5g42450, mitochondrial
sot-r.1	102588557	pentatricopeptide repeat-containing protein At5g42450, mitochondrial
cit-r.1	102618251	pentatricopeptide repeat-containing protein At5g42450, mitochondrial
nta-r.1	107796785	pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like
nta-r.1	107805174	pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(350 genes)

IEA

GO CC

GO MF

GO:0003723 [list] [network] RNA binding	(1549 genes)	IEA
GO:0005515 [list] [network] protein binding	(4389 genes)	IEA

Protein

NP_001151797.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, cyto 1, mito 1, plas 1, vacu 1, cyto_nucl 1, cyto_mito 1, cyto_pero 1, cyto_E.R. 1

(predict for NP_001151797.2)

Subcellular
localization
TargetP

other 3

(predict for NP_001151797.2)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-r.6 for 100285432	zma-u.5 for 100285432	hvu-r.1 for 123444938	ath-u.5 for AT5G42450	sly-u.5 for 104649097	bra-r.6 for 103848549	vvi-u.5 for 100265489	mtr-u.5 for 25488563	sot-r.1 for 102588557	cit-r.1 for 102618251	nta-r.1 for 107796785	nta-r.1 for 107805174