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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G42450   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-r.7   AT5G42450   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.9   AT5G42450   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.2   AT5G42450   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   AT5G42450   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.hor   AT5G42450   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.lig   AT5G42450   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.str   AT5G42450   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   AT5G42450   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100265489   pentatricopeptide repeat-containing protein At5g42450, mitochondrial 
 mtr-u.5   25488563   pentatricopeptide repeat-containing protein At5g42450, mitochondrial 
 sly-u.5   104649097   pentatricopeptide repeat-containing protein At5g42450, mitochondrial 
 zma-u.5   100285432   tetratricopeptide-like helical 

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Top 50 coexpressed genes to AT5G42450 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G42450 (ath-u.5 coexpression data)

CoexMap"834252"


athAT5G42450 | Entrez gene ID : 834252      
Species ath vvi mtr sly zma ppo hvu osa sot tae nta bra cit gma ghi bna bdi sbi cre
Paralog 9 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (230 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1764 genes)  IEA  
Protein NP_001331814.1 [sequence] [blastp]
NP_199060.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  mito 3,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001331814.1)
chlo 5,  chlo_mito 4,  mito 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_199060.3)
Subcellular
localization
TargetP
mito 6  (predict for NP_001331814.1)
mito 7  (predict for NP_199060.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G42450

.
ath-r.7
for
AT5G42450

.
ath-m.9
for
AT5G42450

.
ath-e.2
for
AT5G42450

.
ath-m.4.bio
for
AT5G42450

.
ath-m.4.hor
for
AT5G42450

.
ath-m.4.lig
for
AT5G42450

.
ath-m.4.str
for
AT5G42450

.
ath-m.4.tis
for
AT5G42450

.
vvi-u.5
for
100265489

.
mtr-u.5
for
25488563

.
sly-u.5
for
104649097

.
zma-u.5
for
100285432

.


Ortholog ID: 11434
Species ath sly zma bra vvi mtr hvu sot cit nta nta
Symbol AT5G42450 LOC104649097 LOC100285432 LOC103848549 LOC100265489 LOC25488563 LOC123444938 LOC102588557 LOC102618251 LOC107796785 LOC107805174
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g42450, mitochondrial tetratricopeptide-like helical pentatricopeptide repeat-containing protein At5g42450, mitochondrial pentatricopeptide repeat-containing protein At5g42450, mitochondrial pentatricopeptide repeat-containing protein At5g42450, mitochondrial pentatricopeptide repeat-containing protein At5g42450, mitochondrial pentatricopeptide repeat-containing protein At5g42450, mitochondrial pentatricopeptide repeat-containing protein At5g42450, mitochondrial pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 4
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00240 Pyrimidine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834252 104649097 100285432 103848549 100265489 25488563 123444938 102588557 102618251 107796785 107805174
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