Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102588557   pentatricopeptide repeat-containing protein At5g42450, mitochondrial 
 sly-u.5   104649097   pentatricopeptide repeat-containing protein At5g42450, mitochondrial 
 nta-r.1   107805174   pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like 
 nta-r.1   107796785   pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like 
 ath-u.5   AT5G42450   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103848549   pentatricopeptide repeat-containing protein At5g42450, mitochondrial 
 vvi-u.5   100265489   pentatricopeptide repeat-containing protein At5g42450, mitochondrial 
 mtr-u.5   25488563   pentatricopeptide repeat-containing protein At5g42450, mitochondrial 
 cit-r.1   102618251   pentatricopeptide repeat-containing protein At5g42450, mitochondrial 
 zma-u.5   100285432   tetratricopeptide-like helical 
 hvu-r.1   123444938   pentatricopeptide repeat-containing protein At5g42450, mitochondrial 

close


Top 50 coexpressed genes to 102588557 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102588557 (sot-r.1 coexpression data)

CoexMap"102588557"


sotLOC102588557 | Entrez gene ID : 102588557      
Species sot sly nta ath bra vvi mtr cit zma hvu bdi osa tae bna ppo cre sbi gma ghi
Paralog 1 1 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006345661.1 [sequence] [blastp]
XP_015163472.1 [sequence] [blastp]
XP_015163473.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo 3,  mito_plas 3  (predict for XP_006345661.1)
mito 5,  chlo 3,  mito_plas 3  (predict for XP_015163472.1)
mito 5,  chlo 3,  mito_plas 3  (predict for XP_015163473.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_006345661.1)
mito 8  (predict for XP_015163472.1)
mito 8  (predict for XP_015163473.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102588557
sly-u.5
for
104649097
nta-r.1
for
107805174
nta-r.1
for
107796785
ath-u.5
for
AT5G42450
bra-r.6
for
103848549
vvi-u.5
for
100265489
mtr-u.5
for
25488563
cit-r.1
for
102618251
zma-u.5
for
100285432
hvu-r.1
for
123444938


Ortholog ID: 11434
Species sot sly nta nta ath bra vvi mtr cit zma hvu
Symbol LOC102588557 LOC104649097 LOC107805174 LOC107796785 AT5G42450 LOC103848549 LOC100265489 LOC25488563 LOC102618251 LOC100285432 LOC123444938
Function* pentatricopeptide repeat-containing protein At5g42450, mitochondrial pentatricopeptide repeat-containing protein At5g42450, mitochondrial pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g42450, mitochondrial pentatricopeptide repeat-containing protein At5g42450, mitochondrial pentatricopeptide repeat-containing protein At5g42450, mitochondrial pentatricopeptide repeat-containing protein At5g42450, mitochondrial tetratricopeptide-like helical pentatricopeptide repeat-containing protein At5g42450, mitochondrial
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 4
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00240 Pyrimidine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102588557 104649097 107805174 107796785 834252 103848549 100265489 25488563 102618251 100285432 123444938
The preparation time of this page was 0.1 [sec].