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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103641981   uncharacterized LOC103641981 
 zma-r.6   103641981   uncharacterized LOC103641981 
 zma-m.5   103641981   uncharacterized LOC103641981 
 sbi-r.1   8056603   Niemann-Pick C1 protein 
 osa-u.5   9266400   uncharacterized LOC9266400 
 tae-r.2   123054170   NPC intracellular cholesterol transporter 1 
 tae-r.2   123190059   NPC intracellular cholesterol transporter 1 
 tae-r.2   123046314   NPC intracellular cholesterol transporter 1 
 hvu-r.1   123427500   NPC intracellular cholesterol transporter 1-like 
 bdi-r.1   100832617   NPC intracellular cholesterol transporter 1 
 ath-u.5   AT4G38350   Patched family protein 
 ath-u.5   AT1G42470   Patched family protein 
 gma-u.5   100795551   NPC intracellular cholesterol transporter 1 
 gma-u.5   100810332   NPC intracellular cholesterol transporter 1 
 gma-u.5   100813262   NPC intracellular cholesterol transporter 1 
 sly-u.5   101260723   uncharacterized LOC101260723 
 bra-r.6   103864816   NPC intracellular cholesterol transporter 1 
 bra-r.6   103835189   NPC intracellular cholesterol transporter 1 
 bra-r.6   103829698   NPC intracellular cholesterol transporter 1 
 vvi-u.5   100257163   uncharacterized LOC100257163 
 vvi-u.5   100242789   uncharacterized LOC100242789 
 ppo-u.5   18096072   uncharacterized LOC18096072 
 ppo-u.5   7485640   uncharacterized LOC7485640 
 ppo-u.5   7481690   uncharacterized LOC7481690 
 mtr-u.5   11425301   NPC intracellular cholesterol transporter 1 
 mtr-u.5   25490313   NPC intracellular cholesterol transporter 1 
 ghi-r.1   107922168   NPC intracellular cholesterol transporter 1 
 ghi-r.1   107925446   NPC intracellular cholesterol transporter 1 
 ghi-r.1   107917961   NPC intracellular cholesterol transporter 1 
 bna-r.1   106418356   NPC intracellular cholesterol transporter 1-like 
 bna-r.1   106389752   NPC intracellular cholesterol transporter 1-like 
 bna-r.1   106361551   NPC intracellular cholesterol transporter 1-like 
 sot-r.1   102600216   Niemann-Pick C1 protein-like 
 cit-r.1   102618032   uncharacterized LOC102618032 
 cit-r.1   102615536   uncharacterized LOC102615536 
 nta-r.1   107824090   uncharacterized LOC107824090 
 cre-r.1   CHLRE_12g550900v5   uncharacterized protein 

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Top 50 coexpressed genes to 103641981 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103641981 (zma-u.5 coexpression data)

CoexMap"103641981"


zmaLOC103641981 | Entrez gene ID : 103641981    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 3 1 1 2 3 1 3 2 3 2 3 3 1 2 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma04142 [list] [network] Lysosome (95 genes)
GO BP
GO:0015918 [list] [network] sterol transport  (9 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (3751 genes)  IEA  
GO MF
GO:0032934 [list] [network] sterol binding  (23 genes)  IEA  
GO:0005319 [list] [network] lipid transporter activity  (60 genes)  IEA  
Protein XP_008663507.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  E.R. 1,  chlo 1,  golg 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_008663507.2)
Subcellular
localization
TargetP
scret 6,  mito 5  (predict for XP_008663507.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103641981
zma-r.6
for
103641981
zma-m.5
for
103641981
sbi-r.1
for
8056603
osa-u.5
for
9266400
tae-r.2
for
123054170
tae-r.2
for
123190059
tae-r.2
for
123046314
hvu-r.1
for
123427500
bdi-r.1
for
100832617
ath-u.5
for
AT4G38350
ath-u.5
for
AT1G42470
gma-u.5
for
100795551
gma-u.5
for
100810332
gma-u.5
for
100813262
sly-u.5
for
101260723
bra-r.6
for
103864816
bra-r.6
for
103835189
bra-r.6
for
103829698
vvi-u.5
for
100257163
vvi-u.5
for
100242789
ppo-u.5
for
18096072
ppo-u.5
for
7485640
ppo-u.5
for
7481690
mtr-u.5
for
11425301
mtr-u.5
for
25490313
ghi-r.1
for
107922168
ghi-r.1
for
107925446
ghi-r.1
for
107917961
bna-r.1
for
106418356
bna-r.1
for
106389752
bna-r.1
for
106361551
sot-r.1
for
102600216
cit-r.1
for
102618032
cit-r.1
for
102615536
nta-r.1
for
107824090
cre-r.1
for
CHLRE_12g550900v5


Ortholog ID: 5159
Species zma sbi osa tae tae tae hvu bdi ath ath gma gma gma sly bra bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot cit cit nta cre
Symbol LOC103641981 LOC8056603 LOC9266400 LOC123054170 LOC123190059 LOC123046314 LOC123427500 LOC100832617 AT4G38350 AT1G42470 LOC100795551 LOC100810332 LOC100813262 LOC101260723 LOC103864816 LOC103835189 LOC103829698 LOC100257163 LOC100242789 LOC18096072 LOC7485640 LOC7481690 LOC11425301 LOC25490313 LOC107925446 LOC107917961 LOC107922255 LOC106418356 LOC106352580 LOC106446729 LOC102600216 LOC102618032 LOC102615536 LOC107824090 CHLRE_12g550900v5
Function* uncharacterized LOC103641981 Niemann-Pick C1 protein uncharacterized LOC9266400 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1-like NPC intracellular cholesterol transporter 1 Patched family protein Patched family protein NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 uncharacterized LOC101260723 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 uncharacterized LOC100257163 uncharacterized LOC100242789 uncharacterized LOC18096072 uncharacterized LOC7485640 uncharacterized LOC7481690 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1-like NPC intracellular cholesterol transporter 1-like NPC intracellular cholesterol transporter 1-like Niemann-Pick C1 protein-like uncharacterized LOC102618032 uncharacterized LOC102615536 uncharacterized LOC107824090 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae00010 Glycolysis / Gluconeogenesis 2
tae00030 Pentose phosphate pathway 2
tae01200 Carbon metabolism 2
tae00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae00500 Starch and sucrose metabolism 3
tae00010 Glycolysis / Gluconeogenesis 2
tae00030 Pentose phosphate pathway 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae00500 Starch and sucrose metabolism 3
tae00010 Glycolysis / Gluconeogenesis 2
tae00030 Pentose phosphate pathway 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03013 Nucleocytoplasmic transport 2
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma04142 Lysosome 3
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 2
gma04142 Lysosome 2
gma04136 Autophagy - other 2
gma04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00562 Inositol phosphate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 6
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00511 Other glycan degradation 2
vvi00600 Sphingolipid metabolism 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi04142 Lysosome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi04518 Integrin signaling 3
ghi04142 Lysosome 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi04518 Integrin signaling 3
ghi04142 Lysosome 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 4
bna00620 Pyruvate metabolism 4
bna00640 Propanoate metabolism 4
bna01212 Fatty acid metabolism 4
bna04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 4
bna00620 Pyruvate metabolism 4
bna00640 Propanoate metabolism 4
bna01212 Fatty acid metabolism 4
bna04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 4
bna00620 Pyruvate metabolism 4
bna00640 Propanoate metabolism 4
bna01212 Fatty acid metabolism 4
bna04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 3
cit00190 Oxidative phosphorylation 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103641981 8056603 9266400 123054170 123190059 123046314 123427500 100832617 829992 840851 100795551 100810332 100813262 101260723 103864816 103835189 103829698 100257163 100242789 18096072 7485640 7481690 11425301 25490313 107925446 107917961 107922255 106418356 106352580 106446729 102600216 102618032 102615536 107824090 5719660
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