ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100831004	single myb histone 6-like
bdi-r.1	100830626	single myb histone 2
bdi-r.1	100828330	single myb histone 5
tae-r.2	123070391	single myb histone 4
tae-r.2	123061376	single myb histone 2
tae-r.2	123070023	single myb histone 2
hvu-r.1	123444236	single myb histone 4
hvu-r.1	123443794	single myb histone 2-like
osa-u.5	4327680	single myb histone 4
osa-u.5	4324449	single myb histone 2
osa-u.5	4352780	single myb histone 6
zma-u.5	100274000	putative MYB-domain histone H1 family protein
zma-u.5	542124	single myb histone 6
zma-u.5	542125	single myb histone 4
sbi-r.1	8056578	single myb histone 5
sbi-r.1	8057250	single myb histone 6
sbi-r.1	8069770	single myb histone 4
ath-u.5	AT1G17520	Homeodomain-like/winged-helix DNA-binding family protein
ath-u.5	AT1G72740	Homeodomain-like/winged-helix DNA-binding family protein
ath-u.5	AT1G54260	winged-helix DNA-binding transcription factor family protein
gma-u.5	MYB55	MYB transcription factor
gma-u.5	100779583	telomere repeat-binding factor 2
gma-u.5	100780698	telomere repeat-binding factor 1
sly-u.5	101261899	single myb histone 4
sly-u.5	101263059	telomere repeat-binding factor 1
sly-u.5	101248266	single myb histone 6
bra-r.6	103842747	telomere repeat-binding factor 4
bra-r.6	103874040	telomere repeat-binding factor 2
bra-r.6	103871379	telomere repeat-binding factor 1
vvi-u.5	100261713	telomere repeat-binding factor 1
vvi-u.5	100254369	telomere repeat-binding factor 4
vvi-u.5	104880293	proline-rich receptor-like protein kinase PERK10
ppo-u.5	7464767	telomere repeat-binding factor 2
ppo-u.5	7470752	telomere repeat-binding factor 1
ppo-u.5	7469640	telomere repeat-binding factor 1
mtr-u.5	11413893	serine/arginine-rich-splicing factor SR34
mtr-u.5	11416450	telomere repeat-binding factor 2
mtr-u.5	11421244	telomere repeat-binding factor 5
ghi-r.1	107886936	telomere repeat-binding factor 1
ghi-r.1	107899264	telomere repeat-binding factor 2
ghi-r.1	107906085	telomere repeat-binding factor 4
bna-r.1	106430275	telomere repeat-binding factor 4-like
bna-r.1	106346146	telomere repeat-binding factor 1-like
bna-r.1	106402773	telomere repeat-binding factor 3
sot-r.1	102581727	telomere repeat-binding factor 1
sot-r.1	102587249	single myb histone 6-like
cit-r.1	102620018	telomere repeat-binding factor 4
cit-r.1	102625292	telomere repeat-binding factor 2
cit-r.1	102620353	single myb histone 4-like
nta-r.1	107798416	telomere repeat-binding factor 1
nta-r.1	107802999	telomere repeat-binding factor 1-like
nta-r.1	107797718	telomere repeat-binding factor 1
cre-r.1	CHLRE_04g221200v5	uncharacterized protein

Top 50 coexpressed genes to 100831004 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100831004 (bdi-r.1 coexpression data)

CoexMap"100831004"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006334 [list] [network] nucleosome assembly

(45 genes)

IEA

GO CC

GO:0000786 [list] [network] nucleosome

(64 genes)

IEA

GO MF

GO:0003691 [list] [network] double-stranded telomeric DNA binding

(4 genes)

IEA

Protein

XP_024313575.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, mito 1, plas 1, mito_plas 1

(predict for XP_024313575.1)

Subcellular
localization
TargetP

other 7, mito 3

(predict for XP_024313575.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100831004	bdi-r.1 for 100830626	bdi-r.1 for 100828330	tae-r.2 for 123070391	tae-r.2 for 123061376	tae-r.2 for 123070023	hvu-r.1 for 123444236	hvu-r.1 for 123443794	osa-u.5 for 4327680	osa-u.5 for 4324449	osa-u.5 for 4352780	zma-u.5 for 100274000	zma-u.5 for 542124	zma-u.5 for 542125	sbi-r.1 for 8056578	sbi-r.1 for 8057250	sbi-r.1 for 8069770	ath-u.5 for AT1G17520	ath-u.5 for AT1G72740	ath-u.5 for AT1G54260	gma-u.5 for MYB55	gma-u.5 for 100779583	gma-u.5 for 100780698	sly-u.5 for 101261899	sly-u.5 for 101263059	sly-u.5 for 101248266	bra-r.6 for 103842747	bra-r.6 for 103874040	bra-r.6 for 103871379	vvi-u.5 for 100261713	vvi-u.5 for 100254369	vvi-u.5 for 104880293	ppo-u.5 for 7464767	ppo-u.5 for 7470752	ppo-u.5 for 7469640	mtr-u.5 for 11413893	mtr-u.5 for 11416450	mtr-u.5 for 11421244	ghi-r.1 for 107886936	ghi-r.1 for 107899264	ghi-r.1 for 107906085	bna-r.1 for 106430275	bna-r.1 for 106346146	bna-r.1 for 106402773	sot-r.1 for 102581727	sot-r.1 for 102587249	cit-r.1 for 102620018	cit-r.1 for 102625292	cit-r.1 for 102620353	nta-r.1 for 107798416	nta-r.1 for 107802999	nta-r.1 for 107797718	cre-r.1 for CHLRE_04g221200v5

Ortholog

Ortholog ID: 463

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

TRB2

TRB3

MYB85

Function^*

single myb histone 6-like

single myb histone 2

single myb histone 5

single myb histone 2

single myb histone 4

single myb histone 2-like

single myb histone 5-like

single myb histone 4

single myb histone 2

single myb histone 6

putative MYB-domain histone H1 family protein

single myb histone 6

single myb histone 3

single myb histone 5

single myb histone 6

single myb histone 4

Homeodomain-like/winged-helix DNA-binding family protein

telomere repeat binding factor 3

telomere repeat-binding factor 2

MYB transcription factor MYB85

telomere repeat-binding factor 2

single myb histone 6