ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-u.5	4324449	single myb histone 2
osa-r.6	4324449	single myb histone 2
osa-m.8	4324449	single myb histone 2
osa-e.1	4324449	single myb histone 2
osa-u.5	4352780	single myb histone 6
osa-u.5	4327680	single myb histone 4
tae-r.2	123078852	single myb histone 4
tae-r.2	123078482	single myb histone 2
tae-r.2	123070391	single myb histone 4
hvu-r.1	123444236	single myb histone 4
hvu-r.1	123443794	single myb histone 2-like
bdi-r.1	100831004	single myb histone 6-like
bdi-r.1	100830626	single myb histone 2
bdi-r.1	100828330	single myb histone 5
zma-u.5	100274000	putative MYB-domain histone H1 family protein
zma-u.5	100273130	putative MYB-domain histone H1 family protein
zma-u.5	542123	single myb histone 3
sbi-r.1	8057250	single myb histone 6
sbi-r.1	8056578	single myb histone 5
sbi-r.1	8069770	single myb histone 4
ath-u.5	TRB1	telomere repeat binding factor 1
ath-u.5	AT1G72740	Homeodomain-like/winged-helix DNA-binding family protein
ath-u.5	AT1G54260	winged-helix DNA-binding transcription factor family protein
gma-u.5	MYB55	MYB transcription factor
gma-u.5	MYB107	MYB transcription factor MYB107
gma-u.5	780537	telomere repeat-binding factor 4
sly-u.5	101248266	single myb histone 6
sly-u.5	101261899	single myb histone 4
sly-u.5	101263623	telomere repeat-binding factor 4
bra-r.6	103827702	telomere repeat-binding factor 3
bra-r.6	103831780	telomere repeat-binding factor 4
vvi-u.5	100854718	telomere repeat-binding factor 1
vvi-u.5	104880293	proline-rich receptor-like protein kinase PERK10
ppo-u.5	7464767	telomere repeat-binding factor 2
ppo-u.5	7497744	telomere repeat-binding factor 2
ppo-u.5	7484658	telomere repeat-binding factor 4
mtr-u.5	25486339	telomere repeat-binding factor 1
mtr-u.5	25502915	telomere repeat-binding factor 1
ghi-r.1	107913297	telomere repeat-binding factor 2
ghi-r.1	107908833	telomere repeat-binding factor 1
ghi-r.1	107906085	telomere repeat-binding factor 4
bna-r.1	106448104	telomere repeat-binding factor 3
bna-r.1	106451688	telomere repeat-binding factor 1-like
sot-r.1	102587249	single myb histone 6-like
sot-r.1	102588044	telomere repeat-binding factor 1-like
cit-r.1	102625292	telomere repeat-binding factor 2
cit-r.1	102620018	telomere repeat-binding factor 4
cit-r.1	102629981	telomere repeat-binding factor 1
nta-r.1	107775054	single myb histone 6
nta-r.1	107784527	telomere repeat-binding factor 1
nta-r.1	107787141	telomere repeat-binding factor 4
cre-r.1	CHLRE_04g221200v5	uncharacterized protein

Top 50 coexpressed genes to 4324449 (osa-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4324449 (osa-u.5 coexpression data)

CoexMap"4324449"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006334 [list] [network] nucleosome assembly

(32 genes)

IEA

GO CC

GO:0000786 [list] [network] nucleosome

(63 genes)

IEA

GO MF

GO:0003691 [list] [network] double-stranded telomeric DNA binding

(4 genes)

IEA

Protein

XP_015613057.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, nucl 2, chlo_mito 2, cyto 1, plas 1, cyto_plas 1

(predict for XP_015613057.1)

Subcellular
localization
TargetP

other 6

(predict for XP_015613057.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4324449	osa-r.6 for 4324449	osa-m.8 for 4324449	osa-e.1 for 4324449	osa-u.5 for 4352780	osa-u.5 for 4327680	tae-r.2 for 123078852	tae-r.2 for 123078482	tae-r.2 for 123070391	hvu-r.1 for 123444236	hvu-r.1 for 123443794	bdi-r.1 for 100831004	bdi-r.1 for 100830626	bdi-r.1 for 100828330	zma-u.5 for 100274000	zma-u.5 for 100273130	zma-u.5 for 542123	sbi-r.1 for 8057250	sbi-r.1 for 8056578	sbi-r.1 for 8069770	ath-u.5 for TRB1	ath-u.5 for AT1G72740	ath-u.5 for AT1G54260	gma-u.5 for MYB55	gma-u.5 for MYB107	gma-u.5 for 780537	sly-u.5 for 101248266	sly-u.5 for 101261899	sly-u.5 for 101263623	bra-r.6 for 103827702	bra-r.6 for 103831780	vvi-u.5 for 100854718	vvi-u.5 for 104880293	ppo-u.5 for 7464767	ppo-u.5 for 7497744	ppo-u.5 for 7484658	mtr-u.5 for 25486339	mtr-u.5 for 25502915	ghi-r.1 for 107913297	ghi-r.1 for 107908833	ghi-r.1 for 107906085	bna-r.1 for 106448104	bna-r.1 for 106451688	sot-r.1 for 102587249	sot-r.1 for 102588044	cit-r.1 for 102625292	cit-r.1 for 102620018	cit-r.1 for 102629981	nta-r.1 for 107775054	nta-r.1 for 107784527	nta-r.1 for 107787141	cre-r.1 for CHLRE_04g221200v5

Ortholog

Ortholog ID: 463

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

TRB2

TRB3

MYB85

Function^*

single myb histone 2

single myb histone 6

single myb histone 4

single myb histone 2

single myb histone 4

single myb histone 2-like

single myb histone 5-like

single myb histone 6-like

single myb histone 2

single myb histone 5

putative MYB-domain histone H1 family protein

single myb histone 3

single myb histone 6

single myb histone 5

single myb histone 4

Homeodomain-like/winged-helix DNA-binding family protein

telomere repeat binding factor 3

MYB transcription factor MYB85

telomere repeat-binding factor 2

single myb histone 6