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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   MYB55   MYB transcription factor 
 gma-r.7   MYB55   MYB transcription factor 
 gma-m.5   MYB55   MYB transcription factor 
 gma-u.5   MYB107   MYB transcription factor MYB107 
 gma-u.5   780537   telomere repeat-binding factor 4 
 gma-u.5   778165   telomere repeat-binding factor 2 
 mtr-u.5   25486339   telomere repeat-binding factor 1 
 mtr-u.5   25502915   telomere repeat-binding factor 1 
 ppo-u.5   7469640   telomere repeat-binding factor 1 
 ppo-u.5   18107693   telomere repeat-binding factor 4 
 ppo-u.5   7497744   telomere repeat-binding factor 2 
 ath-u.5   AT1G54260   winged-helix DNA-binding transcription factor family protein 
 ath-u.5   AT1G72740   Homeodomain-like/winged-helix DNA-binding family protein 
 ath-u.5   TRB1   telomere repeat binding factor 1 
 vvi-u.5   100854718   telomere repeat-binding factor 1 
 vvi-u.5   100261713   telomere repeat-binding factor 1 
 vvi-u.5   104880293   proline-rich receptor-like protein kinase PERK10 
 sly-u.5   101248266   single myb histone 6 
 sly-u.5   101263623   telomere repeat-binding factor 4 
 sly-u.5   101261899   single myb histone 4 
 osa-u.5   4324449   single myb histone 2 
 osa-u.5   4352780   single myb histone 6 
 osa-u.5   4327680   single myb histone 4 
 zma-u.5   100274000   putative MYB-domain histone H1 family protein 
 zma-u.5   542123   single myb histone 3 
 zma-u.5   542683   single myb histone 6 

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Top 50 coexpressed genes to MYB55 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MYB55 (gma-u.5 coexpression data)

CoexMap"778173"


gmaMYB55 | Entrez gene ID : 778173      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 2 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006334 [list] [network] nucleosome assembly  (60 genes)  IEA  
GO CC
GO:0000786 [list] [network] nucleosome  (104 genes)  IEA  
GO MF
GO:0003691 [list] [network] double-stranded telomeric DNA binding  (9 genes)  IEA  
Protein NP_001341119.1 [sequence] [blastp]
NP_001341120.1 [sequence] [blastp]
NP_001341121.1 [sequence] [blastp]
XP_040860775.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001341119.1)
nucl 9  (predict for NP_001341120.1)
nucl 10  (predict for NP_001341121.1)
nucl 10  (predict for XP_040860775.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001341119.1)
other 8  (predict for NP_001341120.1)
other 8  (predict for NP_001341121.1)
other 8  (predict for XP_040860775.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
MYB55

.
gma-r.7
for
MYB55

.
gma-m.5
for
MYB55

.
gma-u.5
for
MYB107

.
gma-u.5
for
780537

.
gma-u.5
for
778165

.
mtr-u.5
for
25486339

.
mtr-u.5
for
25502915

.
ppo-u.5
for
7469640

.
ppo-u.5
for
18107693

.
ppo-u.5
for
7497744

.
ath-u.5
for
AT1G54260

.
ath-u.5
for
AT1G72740

.
ath-u.5
for
TRB1

.
vvi-u.5
for
100854718

.
vvi-u.5
for
100261713

.
vvi-u.5
for
104880293

.
sly-u.5
for
101248266

.
sly-u.5
for
101263623

.
sly-u.5
for
101261899

.
osa-u.5
for
4324449

.
osa-u.5
for
4352780

.
osa-u.5
for
4327680

.
zma-u.5
for
100274000

.
zma-u.5
for
542123

.
zma-u.5
for
542683

.


Ortholog ID: 463
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol TRB2 TRB3 MYB85 LOC100779583 LOC101263623 LOC101248266 LOC4327680 LOC4352780 LOC100274000 LOC542123 LOC103872538 LOC103835952 LOC100261713 LOC7497744 LOC18107693 LOC25486339 LOC11436338 LOC123070023 LOC123078482 LOC123444236 LOC123398474 LOC107920908 LOC107906085 LOC106424352 LOC106415662 CHLRE_04g221200v5 LOC8056578 LOC8069770 LOC102589734 LOC102587249 LOC102625292 LOC102629981 LOC100831004 LOC100830626 LOC107775054 LOC107784527
Function* Homeodomain-like/winged-helix DNA-binding family protein telomere repeat binding factor 3 MYB transcription factor MYB85 telomere repeat-binding factor 2 telomere repeat-binding factor 4 single myb histone 6 single myb histone 4 single myb histone 6 putative MYB-domain histone H1 family protein single myb histone 3 telomere repeat-binding factor 4 telomere repeat-binding factor 4 telomere repeat-binding factor 1 telomere repeat-binding factor 2 telomere repeat-binding factor 4 telomere repeat-binding factor 1 telomere repeat-binding factor 5 single myb histone 2 single myb histone 2 single myb histone 4 single myb histone 5-like telomere repeat-binding factor 2 telomere repeat-binding factor 4 telomere repeat-binding factor 1 telomere repeat-binding factor 2-like uncharacterized protein single myb histone 5 single myb histone 4 telomere repeat-binding factor 4 single myb histone 6-like telomere repeat-binding factor 2 telomere repeat-binding factor 1 single myb histone 6-like single myb histone 2 single myb histone 6 telomere repeat-binding factor 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
sly03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 6
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 4
tae00190 Oxidative phosphorylation 4
tae04142 Lysosome 4
tae04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 4
tae00190 Oxidative phosphorylation 4
tae04142 Lysosome 4
tae04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
hvu04144 Endocytosis 3
hvu04145 Phagosome 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot03008 Ribosome biogenesis in eukaryotes 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 6
nta04075 Plant hormone signal transduction 3
nta00760 Nicotinate and nicotinamide metabolism 2
nta00053 Ascorbate and aldarate metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
nta00900 Terpenoid backbone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836894 824147 778043 100779583 101263623 101248266 4327680 4352780 100274000 542123 103872538 103835952 100261713 7497744 18107693 25486339 11436338 123070023 123078482 123444236 123398474 107920908 107906085 106424352 106415662 5717751 8056578 8069770 102589734 102587249 102625292 102629981 100831004 100830626 107775054 107784527
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