ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100831658	pumilio homolog 5
tae-r.2	123112488	pumilio homolog 5
tae-r.2	123121994	pumilio homolog 5
tae-r.2	123151455	pumilio homolog 5
hvu-r.1	123413488	pumilio homolog 5-like
hvu-r.1	123399562	pumilio homolog 5-like
osa-u.5	4346059	pumilio homolog 5
osa-u.5	4347460	pumilio homolog 5
zma-u.5	103653177	pumilio homolog 3
zma-u.5	100193145	uncharacterized LOC100193145
sbi-r.1	110436972	pumilio homolog 5-like
ath-u.5	PUM5	pumilio 5
ath-u.5	PUM6	pumilio 6
gma-u.5	100819166	pumilio homolog 6, chloroplastic
gma-u.5	100811036	pumilio homolog 6, chloroplastic
gma-u.5	100780168	pumilio homolog 6, chloroplastic
sly-u.5	101263093	pumilio homolog 5
bra-r.6	103859846	pumilio homolog 5
bra-r.6	103863640	pumilio homolog 6, chloroplastic
bra-r.6	103869342	pumilio homolog 5
vvi-u.5	100254662	pumilio domain-containing protein PPD1-like
ppo-u.5	18111187	pumilio homolog 6, chloroplastic
ppo-u.5	18100470	pumilio homolog 6, chloroplastic
ppo-u.5	7490841	pumilio homolog 5
mtr-u.5	11445389	pumilio homolog 6, chloroplastic
ghi-r.1	107910598	pumilio homolog 5
ghi-r.1	107887110	pumilio homolog 5
bna-r.1	125608831	pumilio homolog 5-like
bna-r.1	106346520	pumilio homolog 6, chloroplastic-like
bna-r.1	106365557	pumilio homolog 6, chloroplastic-like
sot-r.1	102602234	pumilio homolog 5
cit-r.1	102607004	pumilio homolog 5
cit-r.1	102621102	pumilio homolog 6, chloroplastic
nta-r.1	107786023	pumilio homolog 5
nta-r.1	107827427	pumilio homolog 5

Annotation

functional annotation

KEGG

GO BP

GO:0010608 [list] [network] post-transcriptional regulation of gene expression

(123 genes)

IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(4615 genes)

IEA

GO MF

GO:0003729 [list] [network] mRNA binding

(271 genes)

IEA

Protein

XP_003574782.1 [sequence] [blastp]
XP_024317387.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, mito 2, chlo 1, cyto 1, cysk 1	(predict for XP_003574782.1)
nucl 6, mito 2, chlo 1, cyto 1, cysk 1	(predict for XP_024317387.1)

Subcellular
localization
TargetP

mito 4, other 3	(predict for XP_003574782.1)
mito 4, other 3	(predict for XP_024317387.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100831658	tae-r.2 for 123112488	tae-r.2 for 123121994	tae-r.2 for 123151455	hvu-r.1 for 123413488	hvu-r.1 for 123399562	osa-u.5 for 4346059	osa-u.5 for 4347460	zma-u.5 for 103653177	zma-u.5 for 100193145	sbi-r.1 for 110436972	ath-u.5 for PUM5	ath-u.5 for PUM6	gma-u.5 for 100819166	gma-u.5 for 100811036	gma-u.5 for 100780168	sly-u.5 for 101263093	bra-r.6 for 103859846	bra-r.6 for 103863640	bra-r.6 for 103869342	vvi-u.5 for 100254662	ppo-u.5 for 18111187	ppo-u.5 for 18100470	ppo-u.5 for 7490841	mtr-u.5 for 11445389	ghi-r.1 for 107910598	ghi-r.1 for 107887110	bna-r.1 for 125608831	bna-r.1 for 106346520	bna-r.1 for 106365557	sot-r.1 for 102602234	cit-r.1 for 102607004	cit-r.1 for 102621102	nta-r.1 for 107786023	nta-r.1 for 107827427

Ortholog

Ortholog ID: 3693

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

PUM5

PUM6

Function^*

pumilio homolog 5

pumilio homolog 5-like

pumilio homolog 5

pumilio homolog 3

uncharacterized LOC100193145

pumilio homolog 5-like

pumilio 5

pumilio 6