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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123413488   pumilio homolog 5-like 
 hvu-r.1   123399562   pumilio homolog 5-like 
 tae-r.2   123151455   pumilio homolog 5 
 tae-r.2   123104231   pumilio homolog 5 
 tae-r.2   123121994   pumilio homolog 5 
 bdi-r.1   100831658   pumilio homolog 5 
 osa-u.5   4346059   pumilio homolog 5 
 osa-u.5   4347460   pumilio homolog 5 
 zma-u.5   103653177   pumilio homolog 3 
 zma-u.5   100193145   uncharacterized LOC100193145 
 sbi-r.1   110436972   pumilio homolog 5-like 
 ath-u.5   PUM5   pumilio 5 
 ath-u.5   PUM6   pumilio 6 
 gma-u.5   100819166   pumilio homolog 6, chloroplastic 
 gma-u.5   100811036   pumilio homolog 6, chloroplastic 
 gma-u.5   100780168   pumilio homolog 6, chloroplastic 
 sly-u.5   101263093   pumilio homolog 5 
 bra-r.6   103859846   pumilio homolog 5 
 bra-r.6   103861595   pumilio homolog 6, chloroplastic 
 bra-r.6   103869342   pumilio homolog 5 
 vvi-u.5   100254662   pumilio domain-containing protein PPD1-like 
 ppo-u.5   7490841   pumilio homolog 5 
 ppo-u.5   18111187   pumilio homolog 6, chloroplastic 
 ppo-u.5   18100470   pumilio homolog 6, chloroplastic 
 mtr-u.5   11445389   pumilio homolog 6, chloroplastic 
 ghi-r.1   107910598   pumilio homolog 5 
 ghi-r.1   107887110   pumilio homolog 5 
 bna-r.1   125608831   pumilio homolog 5-like 
 bna-r.1   125604766   pumilio homolog 5-like 
 bna-r.1   125587979   pumilio homolog 5-like 
 sot-r.1   102602234   pumilio homolog 5 
 cit-r.1   102621102   pumilio homolog 6, chloroplastic 
 cit-r.1   102607004   pumilio homolog 5 
 nta-r.1   107827427   pumilio homolog 5 
 nta-r.1   107786023   pumilio homolog 5 

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Top 50 coexpressed genes to 123413488 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123413488 (hvu-r.1 coexpression data)

CoexMap"123413488"


hvuLOC123413488 | Entrez gene ID : 123413488    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 1 2 2 1 2 3 1 3 1 3 1 2 3 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010608 [list] [network] post-transcriptional regulation of gene expression  (137 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (5514 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (308 genes)  IEA  
Protein XP_044962363.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cysk 1,  cyto 1,  vacu 1,  cysk_plas 1  (predict for XP_044962363.1)
Subcellular
localization
TargetP
other 6  (predict for XP_044962363.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123413488
hvu-r.1
for
123399562
tae-r.2
for
123151455
tae-r.2
for
123104231
tae-r.2
for
123121994
bdi-r.1
for
100831658
osa-u.5
for
4346059
osa-u.5
for
4347460
zma-u.5
for
103653177
zma-u.5
for
100193145
sbi-r.1
for
110436972
ath-u.5
for
PUM5
ath-u.5
for
PUM6
gma-u.5
for
100819166
gma-u.5
for
100811036
gma-u.5
for
100780168
sly-u.5
for
101263093
bra-r.6
for
103859846
bra-r.6
for
103861595
bra-r.6
for
103869342
vvi-u.5
for
100254662
ppo-u.5
for
7490841
ppo-u.5
for
18111187
ppo-u.5
for
18100470
mtr-u.5
for
11445389
ghi-r.1
for
107910598
ghi-r.1
for
107887110
bna-r.1
for
125608831
bna-r.1
for
125604766
bna-r.1
for
125587979
sot-r.1
for
102602234
cit-r.1
for
102621102
cit-r.1
for
102607004
nta-r.1
for
107827427
nta-r.1
for
107786023


Ortholog ID: 3693
Species hvu hvu tae tae tae bdi osa osa zma zma sbi ath ath gma gma gma sly bra bra bra vvi ppo ppo ppo mtr ghi ghi bna bna bna sot cit cit nta nta
Symbol LOC123413488 LOC123399562 LOC123170346 LOC123157024 LOC123112488 LOC100831658 LOC4346059 LOC4347460 LOC103653177 LOC100193145 LOC110436972 PUM5 PUM6 LOC100819166 LOC100811036 LOC100780168 LOC101263093 LOC103859846 LOC103861595 LOC103863640 LOC100254662 LOC7490841 LOC18111187 LOC18100470 LOC11445389 LOC107910598 LOC107887110 LOC125587979 LOC106389288 LOC106346520 LOC102602234 LOC102621102 LOC102607004 LOC107827427 LOC107786023
Function* pumilio homolog 5-like pumilio homolog 5-like pumilio homolog 5 pumilio homolog 5 pumilio homolog 5 pumilio homolog 5 pumilio homolog 5 pumilio homolog 5 pumilio homolog 3 uncharacterized LOC100193145 pumilio homolog 5-like pumilio 5 pumilio 6 pumilio homolog 6, chloroplastic pumilio homolog 6, chloroplastic pumilio homolog 6, chloroplastic pumilio homolog 5 pumilio homolog 5 pumilio homolog 6, chloroplastic pumilio homolog 6, chloroplastic pumilio domain-containing protein PPD1-like pumilio homolog 5 pumilio homolog 6, chloroplastic pumilio homolog 6, chloroplastic pumilio homolog 6, chloroplastic pumilio homolog 5 pumilio homolog 5 pumilio homolog 5-like pumilio homolog 5-like pumilio homolog 6, chloroplastic-like pumilio homolog 5 pumilio homolog 6, chloroplastic pumilio homolog 5 pumilio homolog 5 pumilio homolog 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 7
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 7
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00562 Inositol phosphate metabolism 2
sbi04070 Phosphatidylinositol signaling system 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 7
gma04626 Plant-pathogen interaction 5
gma03018 RNA degradation 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
bna04075 Plant hormone signal transduction 2
bna00061 Fatty acid biosynthesis 2
bna00071 Fatty acid degradation 2
bna01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 2
bna00071 Fatty acid degradation 2
bna01212 Fatty acid metabolism 2
bna04146 Peroxisome 2
bna00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123413488 123399562 123170346 123157024 123112488 100831658 4346059 4347460 103653177 100193145 110436972 821569 828694 100819166 100811036 100780168 101263093 103859846 103861595 103863640 100254662 7490841 18111187 18100470 11445389 107910598 107887110 125587979 106389288 106346520 102602234 102621102 102607004 107827427 107786023
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